RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ALDH1A2O94788 518 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 NTSR1P30989 418 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 GBP1P32455 592 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 NOS2P35228 1153 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 SCNN1AP37088 669 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 WASP42768 502 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 LPAL2Q16609 132 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 MPP7Q5T2T1 576 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 CACNA2D4Q7Z3S7 1137 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 RASSF3Q86WH2 238 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 XYLT1Q86Y38 959 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 CHPFQ8IZ52 775 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 BTN2A3PQ96KV6 586 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 ACOX2Q99424 681 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 NUCKS1Q9H1E3 243 aaKnown RBP15.95■□□□□ 0.14
CPSF1-210ENST00000532935 DDIT4Q9NX09 232 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 NCDNQ9UBB6 729 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 XPO7Q9UIA9 1087 aaKnown RBP15.95■□□□□ 0.14
CPSF1-210ENST00000532935 ABCA7Q8IZY2 2146 aa15.95■□□□□ 0.14
CPSF1-210ENST00000532935 MUC22E2RYF6 1773 aaPredicted RBP15.95■□□□□ 0.14
CPSF1-210ENST00000532935 SYNJ2BP-COX16A0A087WUM0 186 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 A0A1B0GTH6 734 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 CYP1A1P04798 512 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 SLC2A3P11169 496 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 HOXB2P14652 356 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 MATKP42679 507 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 RNASE9P60153 205 aaKnown RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 ARID5AQ03989 594 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 ZSCAN23Q3MJ62 389 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 C2CD6Q53TS8 623 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 FAM102AQ5T9C2 384 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 RNF43Q68DV7 783 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 LAIR1Q6GTX8 287 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 SDE2Q6IQ49 451 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 TRIM72Q6ZMU5 477 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 DCLK2Q8N568 766 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 ATP6V0D2Q8N8Y2 350 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 HJURPQ8NCD3 748 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 MDGA1Q8NFP4 955 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 UCMAQ8WVF2 138 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 MYEOVQ96EZ4 313 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 PRICKLE1Q96MT3 831 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 NAP1L5Q96NT1 182 aaPredicted RBP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 TPSD1Q9BZJ3 242 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.94■□□□□ 0.14
CPSF1-210ENST00000532935 COX16Q9P0S2 106 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 NUP205Q92621 2012 aa15.94■□□□□ 0.14
CPSF1-210ENST00000532935 A0A1W2PQF6 199 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 TCRBV21S2A2A0A5A6 115 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 TYW5A2RUC4 315 aaKnown RBP15.93■□□□□ 0.14
CPSF1-210ENST00000532935 KCNU1A8MYU2 1149 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 CAVIN2O95810 425 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 SERPINC1P01008 464 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 HLA-FP30511 346 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 CCR1P32246 355 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 TPM4P67936 248 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 NME3Q13232 169 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 EIF4HQ15056 248 aaKnown RBP15.93■□□□□ 0.14
CPSF1-210ENST00000532935 MS4A13Q5J8X5 152 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 RAP1GAP2Q684P5 730 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 TMEM215Q68D42 235 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.93■□□□□ 0.14
CPSF1-210ENST00000532935 CHSY1Q86X52 802 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 WFDC5Q8TCV5 224 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 RNF34Q969K3 372 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 NPY6RQ99463 290 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 GABRG3Q99928 467 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 ABCB8Q9NUT2 735 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 ELOVL2Q9NXB9 296 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 CACNA2D2Q9NY47 1150 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 STIM2Q9P246 746 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 SLC12A6Q9UHW9 1150 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 GMEB2Q9UKD1 530 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
CPSF1-210ENST00000532935 A0A1W2PQC6 194 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 GOLGA8SH3BPF8 625 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 M0QYT0 321 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 NPC1O15118 1278 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 TIMM44O43615 452 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 ABCB4P21439 1286 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 TACR2P21452 398 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 MMP8P22894 467 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 RPS24P62847 133 aaKnown RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 E2F5Q15329 346 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 OTUD1Q5VV17 481 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 MMS22LQ6ZRQ5 1243 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 KIAA0907Q7Z7F0 614 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 KBTBD6Q86V97 674 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 LGI2Q8N0V4 545 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 FAM160A2Q8N612 972 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 ZNF557Q8N988 423 aaPredicted RBP15.92■□□□□ 0.14
CPSF1-210ENST00000532935 SLC30A5Q8TAD4 765 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 WFIKKN2Q8TEU8 576 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 HMGB4Q8WW32 186 aa15.92■□□□□ 0.14
CPSF1-210ENST00000532935 SORCS1Q8WY21 1168 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms