RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CCDC186Q7Z3E2 898 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 C12orf56Q8IXR9 622 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ARHGAP18Q8N392 663 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 BAP1Q92560 729 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 EDEM1Q92611 657 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 NXPE2Q96DL1 559 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 NAF1Q96HR8 494 aaKnown RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 SLC6A18Q96N87 628 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 OMDQ99983 421 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 PCED1AQ9H1Q7 454 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 SGK2Q9HBY8 427 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 FAM13BQ9NYF5 915 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 SFMBT1Q9UHJ3 866 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 MTMR6Q9Y217 621 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 A0A1B0GTQ1 180 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 GOLGA6L7A0A1B0GV03 622 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 PVALEFA0A1B0GWK0 134 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TLX3O43711 291 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 DFNA5O60443 496 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TBL1XO60907 577 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 RFPL3O75679 317 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 RNASEH2AO75792 299 aaKnown RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 NR3C1P04150 777 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TRIM49P0CI25 452 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TRIM49CP0CI26 452 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 PABPC1P11940 636 aaKnown RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 KRT13P13646 458 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 HLA-FP30511 346 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 VAMP7P51809 220 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TKTL1P51854 596 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CXADRP78310 365 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CLDN10P78369 228 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 BNIP3Q12983 259 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 STK4Q13043 487 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CUL4AQ13619 759 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 HES3Q5TGS1 186 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 ERICH6BQ5W0A0 696 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 ZNF776Q68DI1 518 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 PIGZQ86VD9 579 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 DHX40Q8IX18 779 aaKnown RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CEP57L1Q8IYX8 460 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CPXM2Q8N436 756 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 WFIKKN2Q8TEU8 576 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 ELF4Q99607 663 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 CYP3A43Q9HB55 503 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 LRRC4Q9HBW1 653 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 APOBEC3GQ9HC16 384 aaKnown RBP9.64□□□□□ -0.87
NEDD8-206ENST00000531430 PNPLA8Q9NP80 782 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 EXOC1Q9NV70 894 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 GGA2Q9UJY4 613 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 USP3Q9Y6I4 520 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 TMEM131Q92545 1883 aa9.64□□□□□ -0.87
NEDD8-206ENST00000531430 A0A1W2PP55 124 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 LRRC72A6NJI9 287 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 E9PAM4 449 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 IKBKBO14920 756 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 VILLO15195 856 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 CALUO43852 315 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 PPP6R2O75170 966 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ZBED1O96006 694 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 DLDP09622 509 aaKnown RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 HOXD9P28356 352 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 CD70P32970 193 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ME1P48163 572 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 NASPP49321 788 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 GALCP54803 685 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 RACK1P63244 317 aaKnown RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ZBTB16Q05516 673 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 SFSWAPQ12872 951 aaKnown RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 RFWD3Q6PCD5 774 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 NCEH1Q6PIU2 408 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 GPR155Q7Z3F1 870 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ADIPOR2Q86V24 386 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 MMAAQ8IVH4 418 aaKnown RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 CCDC117Q8IWD4 279 aaPredicted RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 AHI1Q8N157 1196 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ZNF276Q8N554 614 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 UBA3Q8TBC4 463 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 TAS1R2Q8TE23 839 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 GOLGA1Q92805 767 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 PLD4Q96BZ4 506 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 IPO9Q96P70 1041 aaKnown RBP9.63□□□□□ -0.87
NEDD8-206ENST00000531430 ULBP1Q9BZM6 244 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 NEUROG2Q9H2A3 272 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 TMEM245Q9H330 911 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 PRORYQ9H606 182 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 OSGEPQ9NPF4 335 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 GDF3Q9NR23 364 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 DMAC2Q9NW81 257 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 SERTAD1Q9UHV2 236 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
NEDD8-206ENST00000531430 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms