RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FAM193BQ96PV7 902 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 THAP9Q9H5L6 903 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 METTL14Q9HCE5 456 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 DPP3Q9NY33 737 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SPG21Q9NZD8 308 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 MARCH2Q9P0N8 246 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ARMCX3Q9UH62 379 aaPredicted RBP9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ADAM28Q9UKQ2 775 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ITGA11Q9UKX5 1188 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 PCDHB10Q9UN67 800 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 SIT1Q9Y3P8 196 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 ATG2AQ2TAZ0 1938 aa9.38□□□□□ -0.91
CCDC90B-217ENST00000530253 BRWD1Q9NSI6 2320 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 IKBKBO14920 756 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 B3GAT3O94766 335 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 GNA14O95837 355 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 TNNC2P02585 160 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 ALDH2P05091 517 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 TMEM191BP0C7N4 346 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 KRT13P13646 458 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 TNNI1P19237 187 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 BRCC3P46736 316 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 GCLMP48507 274 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 ALDH7A1P49419 539 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 AP3M2P53677 418 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 GPM6BQ13491 265 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 CBWD6Q4V339 395 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 CBWD3Q5JTY5 395 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 CBWD5Q5RIA9 395 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 FUT10Q6P4F1 479 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 DCLRE1AQ6PJP8 1040 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 LRSAM1Q6UWE0 723 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 AOPEPQ8N6M6 819 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 HASPINQ8TF76 798 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 TMEM169Q96HH4 297 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 ANKRD36BP1Q96IX9 119 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 LCORQ96JN0 433 aaPredicted RBP9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 FNBP1Q96RU3 617 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 HERC2P3Q9BVR0 1158 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 COLEC11Q9BWP8 271 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 ZBP1Q9H171 429 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 TMEM8AQ9HCN3 771 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 ALG13Q9NP73 1137 aaKnown RBP9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 CLEC1BQ9P126 229 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 LZTS1Q9Y250 596 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 NCOR1O75376 2440 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 MUC3AQ02505 3323 aa9.37□□□□□ -0.91
CCDC90B-217ENST00000530253 C5orf42Q9H799 3197 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 SF3B1O75533 1304 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 C9orf118A6NHY6 69 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 I3L4J1 428 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 M0QZQ0 153 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 PMM2O15305 246 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 SOD2P04179 222 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 GTF2H1P32780 548 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 MXI1P50539 228 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 LILRA4P59901 499 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 UBE3AQ05086 875 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 CCDC40Q4G0X9 1142 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 DCAF17Q5H9S7 520 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 MIIPQ5JXC2 388 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 APTXQ7Z2E3 356 aaKnown RBP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 LIMS2Q7Z4I7 341 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 TAS1R2Q8TE23 839 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 CACTINQ8WUQ7 758 aaKnown RBP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 POF1BQ8WVV4 589 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 KLHL6Q8WZ60 621 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 KISS1RQ969F8 398 aaPredicted RBP9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 LMAN2LQ9H0V9 348 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 FANCLQ9NW38 375 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 EFR3BQ9Y2G0 817 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 COQ4Q9Y3A0 265 aa9.36□□□□□ -0.91
CCDC90B-217ENST00000530253 VWA8A3KMH1 1905 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 KCNJ18B7U540 433 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 TADA2AO75478 443 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 TRIOO75962 3097 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 FGFR1OPO95684 399 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 ASS1P00966 412 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 HLA-DRAP01903 254 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 POU3F3P20264 500 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 PAX3P23760 479 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 SCN1AP35498 2009 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 PNPLA4P41247 253 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 FMO5P49326 533 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 TAF6P49848 677 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 ZNF143P52747 638 aaPredicted RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 MYL6P60660 151 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 RACK1P63244 317 aaKnown RBP9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 RBP5P82980 135 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 KCNJ12Q14500 433 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 HSP90AA4PQ58FG1 418 aa9.35□□□□□ -0.91
CCDC90B-217ENST00000530253 MROH9Q5TGP6 573 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms