RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 WDR17Q8IZU2 1322 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 HMX3A6NHT5 357 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 B9A039 149 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 PPP6CO00743 305 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 NKX2-8O15522 239 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
CTR9-204ENST00000529355 HOXD12P35452 270 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 TAS2R50P59544 299 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 SHC2P98077 582 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 FOXF2Q12947 444 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 CUL4BQ13620 913 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 CERKLQ49MI3 558 aaPredicted RBP5.28□□□□□ -1.56
CTR9-204ENST00000529355 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 TANGO2Q6ICL3 276 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 VSTM1Q6UX27 236 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 RFX6Q8HWS3 928 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 LAS2Q8IYD9 372 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 TBC1D20Q96BZ9 403 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 HIC2Q96JB3 615 aa5.28□□□□□ -1.56
CTR9-204ENST00000529355 ELAC1Q9H777 363 aaKnown RBP5.28□□□□□ -1.56
CTR9-204ENST00000529355 UBE2J1Q9Y385 318 aaPredicted RBP5.28□□□□□ -1.56
CTR9-204ENST00000529355 SPATA31A1Q5TZJ5 1347 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 H0Y3Z8 333 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 PPFIA2O75334 1257 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 RFPL3SP0C7P2 107 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 ST6GAL1P15907 406 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 HOXD9P28356 352 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 EPHB2P29323 1055 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 SLC37A1P57057 533 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 FOXO1Q12778 655 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 SLC10A2Q12908 348 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 PDCLQ13371 301 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 PFKFB3Q16875 520 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 TTC22Q5TAA0 569 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 ATPAF1Q5TC12 328 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 SLC18B1Q6NT16 456 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 SYCE2Q6PIF2 218 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 PTF1AQ7RTS3 328 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 EXD3Q8N9H8 876 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 OSR1Q8TAX0 266 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 C3orf49Q96BT1 292 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 TRAPPC9Q96Q05 1148 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 DDX23Q9BUQ8 820 aaKnown RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 TMEM120AQ9BXJ8 343 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 ABHD16BQ9H3Z7 469 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 ARL8BQ9NVJ2 186 aa5.27□□□□□ -1.57
CTR9-204ENST00000529355 SIRT4Q9Y6E7 314 aaPredicted RBP5.27□□□□□ -1.57
CTR9-204ENST00000529355 SLC22A23A1A5C7 686 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ADAM10O14672 748 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 KRT38O76015 456 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 TUBB4AP04350 444 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 PRR35P0CG20 571 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 MATN1P21941 496 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 CD38P28907 300 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 HOXA7P31268 230 aaPredicted RBP5.26□□□□□ -1.57
CTR9-204ENST00000529355 SLC8A1P32418 973 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 GRK6P43250 576 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ABCG1P45844 678 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 SOX2P48431 317 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 RGS19P49795 217 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ZNF268Q14587 947 aaPredicted RBP5.26□□□□□ -1.57
CTR9-204ENST00000529355 DAZAP2Q15038 168 aaPredicted RBP5.26□□□□□ -1.57
CTR9-204ENST00000529355 MIS18BP1Q6P0N0 1132 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 NFRKBQ6P4R8 1299 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 LDHAL6AQ6ZMR3 332 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 SYNE3Q6ZMZ3 975 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ZNF813Q6ZN06 617 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 SYT13Q7L8C5 426 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 MOGAT3Q86VF5 341 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ZNF575Q86XF7 245 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 RHPN2Q8IUC4 686 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 SRRM1Q8IYB3 904 aaKnown RBP5.26□□□□□ -1.57
CTR9-204ENST00000529355 GALNT16Q8N428 558 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 ASB12Q8WXK4 309 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 CCT6BQ92526 530 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 FCRL5Q96RD9 977 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 TAF1DQ9H5J8 278 aaPredicted RBP5.26□□□□□ -1.57
CTR9-204ENST00000529355 FLRT1Q9NZU1 646 aa5.26□□□□□ -1.57
CTR9-204ENST00000529355 hCG_1642624A0A1W2PR95 340 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 FAM90A20PA6NIJ5 464 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 KCNU1A8MYU2 1149 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 CYP3A4P08684 503 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 LYL1P12980 280 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 ATP5F1P24539 256 aaPredicted RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 GRK5P34947 590 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 RBM6P78332 1123 aaKnown RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 DMWDQ09019 674 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 MTA1Q13330 715 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 PRKG1Q13976 671 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 RPS6KA2Q15349 733 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 PDCD2Q16342 344 aaPredicted RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 ZNF569Q5MCW4 686 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 MEX3CQ5U5Q3 659 aaKnown RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 KIAA1614Q5VZ46 1190 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 ZNF626Q68DY1 528 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 DHRS13Q6UX07 377 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 CNGA4Q8IV77 575 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 ADGRF3Q8IZF5 1079 aa5.25□□□□□ -1.57
CTR9-204ENST00000529355 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
CTR9-204ENST00000529355 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms