RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TMPRSS12Q86WS5 348 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 SFTPA1Q8IWL2 248 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 FAM71AQ8IYT1 594 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 RGL4Q8IZJ4 473 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 ANKRD20A12PQ8NF67 263 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 DNASE2BQ8WZ79 361 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 MYLPFQ96A32 169 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 MYRFLQ96LU7 910 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 SLC22A12Q96S37 553 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 NT5C1AQ9BXI3 368 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 STK33Q9BYT3 514 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 ZNF518BQ9C0D4 1074 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 DNMT3LQ9UJW3 386 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 ARHGAP26Q9UNA1 814 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 PCDHB4Q9Y5E5 795 aa11.47□□□□□ -0.57
NEDD8-204ENST00000526430 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 PLK4O00444 970 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 TNFSF14O43557 240 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 CCDC130P13994 396 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 BDNFP23560 247 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 GRIA2P42262 883 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 MATKP42679 507 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 MFAP3P55082 362 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 POLR2FP61218 127 aaKnown RBP11.46□□□□□ -0.57
NEDD8-204ENST00000526430 RHDQ02161 417 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-204ENST00000526430 ARHGAP17Q68EM7 881 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 ENOSF1Q7L5Y1 443 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
NEDD8-204ENST00000526430 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-204ENST00000526430 CYFIP2Q96F07 1278 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 KCNK16Q96T55 309 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 SMOQ99835 787 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 GAREM1Q9H706 876 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 PRDM16Q9HAZ2 1276 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 NLRC4Q9NPP4 1024 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 FNDC3AQ9Y2H6 1198 aaKnown RBP11.46□□□□□ -0.57
NEDD8-204ENST00000526430 CKAP5Q14008 2032 aa11.46□□□□□ -0.57
NEDD8-204ENST00000526430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 F8VZ95 297 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TULP2O00295 520 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 O00370 1275 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 CYP26A1O43174 497 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 PAEPP09466 180 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 C6P13671 934 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 PFKLP17858 780 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 IL12RB1P42701 662 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 MAGEA11P43364 429 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 CSRP3P50461 194 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 PDE6CP51160 858 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TSPY1Q01534 308 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TLE3Q04726 772 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TBX2Q13207 712 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 RTP5Q14D33 572 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 FILIP1LQ4L180 1135 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TAF1BQ53T94 588 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 FIGNQ5HY92 759 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 C6orf118Q5T5N4 469 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 EMC10Q5UCC4 262 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 IRF2BP2Q7Z5L9 587 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 PHTF2Q8N3S3 785 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 WDTC1Q8N5D0 677 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 STKLD1Q8NE28 680 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 RHBDD1Q8TEB9 315 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TNIP3Q96KP6 325 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 HEXIM2Q96MH2 286 aaKnown RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 SYT11Q9BT88 431 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 NRSN2Q9GZP1 204 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 IL21RQ9HBE5 538 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 CSNK1G1Q9HCP0 422 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 CD248Q9HCU0 757 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 TRPC7Q9HCX4 862 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 ABCB6Q9NP58 842 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 ABI2Q9NYB9 513 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 MAGED2Q9UNF1 606 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-204ENST00000526430 PCDHB5Q9Y5E4 795 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 LRRK2Q5S007 2527 aa11.45□□□□□ -0.58
NEDD8-204ENST00000526430 NDUFS2O75306 463 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 TPM2P07951 284 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 VDRP11473 427 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 HOXB2P14652 356 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 CHRNB2P17787 502 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 BRD2P25440 801 aaKnown RBP11.44□□□□□ -0.58
NEDD8-204ENST00000526430 HNF1BP35680 557 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 TPM4P67936 248 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 SUZ12Q15022 739 aaKnown RBP11.44□□□□□ -0.58
NEDD8-204ENST00000526430 DHCR24Q15392 516 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 CNGA2Q16280 664 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 NFE2Q16621 373 aaPredicted RBP11.44□□□□□ -0.58
NEDD8-204ENST00000526430 DDR2Q16832 855 aa11.44□□□□□ -0.58
NEDD8-204ENST00000526430 PREPLQ4J6C6 727 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms