RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 NT5MQ9NPB1 228 aa9.09□□□□□ -0.95
PPFIA1-206ENST00000526262 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
PPFIA1-206ENST00000526262 CDY1Q9Y6F8 540 aa9.09□□□□□ -0.95
PPFIA1-206ENST00000526262 F8W8V4 182 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SYN3O14994 580 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 EFCAB14O75071 495 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CSH1P0DML2 217 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CSH2P0DML3 217 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 KRT4P19013 534 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CDKN2BP42772 138 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PEX5P50542 639 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 INCA1Q0VD86 236 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 USP10Q14694 798 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 KCTD19Q17RG1 926 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PABPC1LQ4VXU2 614 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FUT10Q6P4F1 479 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PRUNE1Q86TP1 453 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 MYLK4Q86YV6 388 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 HERC6Q8IVU3 1022 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 MDM1Q8TC05 714 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 GPR152Q8TDT2 470 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 TMEM40Q8WWA1 233 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 EPN3Q9H201 632 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 NSMCE4AQ9NXX6 385 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 NINJ2Q9NZG7 142 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 DPP7Q9UHL4 492 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 NR2E1Q9Y466 385 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FAM163BP0C2L3 166 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SSTR1P30872 391 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ZNF844Q08AG5 666 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PLD1Q13393 1074 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 LPIN1Q14693 890 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 HECTD3Q5T447 861 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CPNE8Q86YQ8 564 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 RNF135Q8IUD6 432 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CARNMT1Q8N4J0 409 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ATXN3LQ9H3M9 355 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SUDS3Q9H7L9 328 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FIS1Q9Y3D6 152 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 MRPL42Q9Y6G3 142 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ZBTB42B2RXF5 422 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 E5RI56 91 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FGF10O15520 208 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 AIF1P55008 147 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ST8SIA6P61647 398 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 RCN2Q14257 317 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 VARS2Q5ST30 1063 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 KDM7AQ6ZMT4 941 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 YAF2Q8IY57 180 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 LGI2Q8N0V4 545 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CCT8L2Q96SF2 557 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 PAFAH2Q99487 392 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 AGO3Q9H9G7 860 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SARS2Q9NP81 518 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ARHGEF38Q9NXL2 777 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SFMBT1Q9UHJ3 866 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SLC24A2Q9UI40 661 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 VPS28Q9UK41 221 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CBX4O00257 560 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CCL5P13501 91 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 VEGFBP49765 207 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 NDUFV1P49821 464 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SLC5A3P53794 718 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 POLD3Q15054 466 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FASTKD1Q53R41 847 aaKnown RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SPDYCQ5MJ68 293 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 TMEM110Q86TL2 294 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CCNYL1Q8N7R7 359 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 GBP7Q8N8V2 638 aaPredicted RBP9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 GANCQ8TET4 914 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 ART4Q93070 314 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 GRAMD1AQ96CP6 724 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 KLHL29Q96CT2 875 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 FGD4Q96M96 766 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SPATA13Q96N96 652 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 SLC4A5Q9BY07 1137 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 TBC1D13Q9NVG8 400 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 DCTN4Q9UJW0 460 aa9.08□□□□□ -0.96
PPFIA1-206ENST00000526262 CCDC195A0A1B0GUA6 201 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 PIRO00625 290 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 TLR5O60602 858 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 ANKRD20A2Q5SQ80 823 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 ANKRD20A1Q5TYW2 823 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 SLC26A11Q86WA9 606 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 MREGQ8N565 214 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 ETNK2Q9NVF9 386 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 SPG21Q9NZD8 308 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 DNMT3LQ9UJW3 386 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 GJD2Q9UKL4 321 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 MDM4O15151 490 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 PPFIA2O75334 1257 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 DCTN3O75935 186 aa9.07□□□□□ -0.96
PPFIA1-206ENST00000526262 AARSP49588 968 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms