RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 TBX4P57082 545 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 DEUP1Q05D60 604 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 MESDQ14696 234 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 SLC25A52Q3SY17 297 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ARHGAP15Q53QZ3 475 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 FAM133BQ5BKY9 247 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 AADACL2Q6P093 401 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 RSRC2Q7L4I2 434 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 BEND5Q7L4P6 421 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 C12orf40Q86WS4 652 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 TMEM25Q86YD3 366 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ZDHHC17Q8IUH5 632 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 DENND1CQ8IV53 801 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ADHFE1Q8IWW8 467 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ZNF683Q8IZ20 524 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ZDHHC14Q8IZN3 488 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 SLC44A3Q8N4M1 653 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 ZNF276Q8N554 614 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 LRRC57Q8N9N7 239 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 TDRD5Q8NAT2 981 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 LEMD2Q8NC56 503 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 OR52K2Q8NGK3 314 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 TPCN2Q8NHX9 752 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 WFDC5Q8TCV5 224 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 RNF139Q8WU17 664 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 RFFLQ8WZ73 363 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 KRT35Q92764 455 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 BHMTQ93088 406 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PRICKLE1Q96MT3 831 aaPredicted RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 NECTIN4Q96NY8 510 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 GCNAQ96QF7 691 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PRMT1Q99873 361 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 HERPUD2Q9BSE4 406 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 FAM204AQ9H8W3 233 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 KCNK12Q9HB15 430 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 FBRSL1Q9HCM7 1045 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 PARVAQ9NVD7 372 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 EVA1BQ9NVM1 165 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 KLHL11Q9NVR0 708 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.74□□□□□ -1.33
CD44-214ENST00000525211 CTTNBP2NLQ9P2B4 639 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 WDR35Q9P2L0 1181 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PCSK1NQ9UHG2 260 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 FKBPLQ9UIM3 349 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 PACSIN2Q9UNF0 486 aaPredicted RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 USTQ9Y2C2 406 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 MFHAS1Q9Y4C4 1052 aa6.74□□□□□ -1.33
CD44-214ENST00000525211 KIF26AQ9ULI4 1882 aaPredicted RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 HELZP42694 1942 aaKnown RBP6.74□□□□□ -1.33
CD44-214ENST00000525211 COL4A2P08572 1712 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 NUP210Q8TEM1 1887 aaPredicted RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 MACROD2A1Z1Q3 448 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CAPN9O14815 690 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 PAGE1O75459 146 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CNTN5O94779 1100 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 PROSCO94903 275 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 FGF19O95750 216 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 FTCDO95954 541 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CD48P09326 243 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 MYBL1P10243 752 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 COMTP21964 271 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 DDX6P26196 483 aaKnown RBP eCLIP6.73□□□□□ -1.33
CD44-214ENST00000525211 WEE1P30291 646 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 HOXC13P31276 330 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 AVPR1AP37288 418 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 SLC6A11P48066 632 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 PPP3CCP48454 512 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 ARSEP51690 589 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 SLC25A11Q02978 314 aaKnown RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 MMRN1Q13201 1228 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 TCEAL1Q15170 157 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 LLGL1Q15334 1064 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 KCTD19Q17RG1 926 aaPredicted RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 SMTNL2Q2TAL5 461 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 EML3Q32P44 896 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 MS4A13Q5J8X5 152 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 KCNT1Q5JUK3 1230 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 RAP1GAP2Q684P5 730 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CC2D1AQ6P1N0 951 aaPredicted RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 SCYL2Q6P3W7 929 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 DCUN1D2Q6PH85 259 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 RHBDF2Q6PJF5 856 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 HTR3DQ70Z44 454 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 ARCQ7LC44 396 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 OTOP3Q7RTS5 596 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 KIAA1328Q86T90 577 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 VPS36Q86VN1 386 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 RNF135Q8IUD6 432 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.73□□□□□ -1.33
CD44-214ENST00000525211 TP53INP2Q8IXH6 220 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CFAP52Q8N1V2 620 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 ARHGAP18Q8N392 663 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 BPIFB1Q8TDL5 484 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 CTNNBL1Q8WYA6 563 aaPredicted RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 IGSF8Q969P0 613 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 ELSPBP1Q96BH3 223 aa6.73□□□□□ -1.33
CD44-214ENST00000525211 PGAP3Q96FM1 320 aaPredicted RBP6.73□□□□□ -1.33
CD44-214ENST00000525211 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms