RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GABRQQ9UN88 632 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 SHOC2Q9UQ13 582 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 MED16Q9Y2X0 877 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 PCDHAC2Q9Y5I4 1007 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 HTTP42858 3142 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 PHIPQ8WWQ0 1821 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 CHD8Q9HCK8 2581 aa3.51□□□□□ -1.85
CSDE1-208ENST00000524652 PTPRFP10586 1907 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 CYP2D7A0A087X1C5 515 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 POC1B-GALNT4F8VUJ3 575 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 PSMD14O00487 310 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 PPEF2O14830 753 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 USP1O94782 785 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 DDNO94850 711 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 MAP4K4O95819 1239 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 DLDP09622 509 aaKnown RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 CYP2C9P11712 490 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 SLC5A1P13866 664 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 HDCP19113 662 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 SFPQP23246 707 aaKnown RBP eCLIP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 LRPAP1P30533 357 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 MMP13P45452 471 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 PDE1AP54750 535 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 SP2Q02086 613 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 CXCL9Q07325 125 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 OS9Q13438 667 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 LAMB3Q13751 1172 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 TBC1D25Q3MII6 688 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 KIRREL2Q6UWL6 708 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 NAPRTQ6XQN6 538 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 Q6ZWC4 215 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 CHD1LQ86WJ1 897 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 GALNT4Q8N4A0 578 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 PNLDC1Q8NA58 520 aaKnown RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 PCSK9Q8NBP7 692 aaKnown RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 DAZAP1Q96EP5 407 aaKnown RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 NEUROD6Q96NK8 337 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 SH2D3AQ9BRG2 576 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 KRTAP1-5Q9BYS1 174 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 RWDD1Q9H446 243 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 HMG20BQ9P0W2 317 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 LUC7L2Q9Y383 392 aaKnown RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 UNC80Q8N2C7 3258 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 GREB1LQ9C091 1923 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-208ENST00000524652 MYH4Q9Y623 1939 aa3.5□□□□□ -1.85
CSDE1-208ENST00000524652 ASTN2O75129 1339 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 FAM205AQ6ZU69 1335 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 SMIM35A0A1B0GVV1 85 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CHRM5P08912 532 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 IFIT1P09914 478 aaKnown RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 MX1P20591 662 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 KCNJ4P48050 445 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 KCNJ5P48544 419 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 PDE6CP51160 858 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 WNT3P56703 355 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CHAF1AQ13111 956 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 DAZAP2Q15038 168 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 TRIP6Q15654 476 aaKnown RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CERKLQ49MI3 558 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 HSP90AB4PQ58FF6 505 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 KHDC1LQ5JSQ8 128 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 SLC2A7Q6PXP3 512 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CENPQQ7L2Z9 268 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 ADGRA1Q86SQ6 560 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 ZBTB46Q86UZ6 589 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 KRT73Q86Y46 540 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 ERC1Q8IUD2 1116 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CLASRPQ8N2M8 674 aaKnown RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 ABHD11Q8NFV4 315 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 XAGE5Q8WWM1 108 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 R3HDM4Q96D70 268 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 CCDC136Q96JN2 1154 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 RITA1Q96K30 269 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 SNX18Q96RF0 628 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 EYA3Q99504 573 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 MACROD1Q9BQ69 325 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 TMEM79Q9BSE2 394 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 THAP7Q9BT49 309 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 COA1Q9GZY4 146 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 VPS33BQ9H267 617 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 VPS16Q9H269 839 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 IL25Q9H293 177 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 BOLA2Q9H3K6 86 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 PIH1D3Q9NQM4 214 aaKnown RBP3.49□□□□□ -1.85
CSDE1-208ENST00000524652 ANLNQ9NQW6 1124 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 XPR1Q9UBH6 696 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 STAP2Q9UGK3 403 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 STXBP5LQ9Y2K9 1186 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 PARP14Q460N5 1801 aa3.49□□□□□ -1.85
CSDE1-208ENST00000524652 SALL1Q9NSC2 1324 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 DNAH12Q6ZR08 3092 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 DOCK1Q14185 1865 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 UBE2Q2LH0YL09 131 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 PRKCBP05771 671 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 THP07101 528 aa3.48□□□□□ -1.85
CSDE1-208ENST00000524652 IFIT2P09913 472 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 XRCC6P12956 609 aaKnown RBP eCLIP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 HOXB6P17509 224 aaKnown RBP3.48□□□□□ -1.85
CSDE1-208ENST00000524652 EPS15P42566 896 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms