RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	LRRC14	Q15048	493 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	RASA2	Q15283	850 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCDC142	Q17RM4	750 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRIT3	Q3SXY7	679 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	TNFAIP8L3	Q5GJ75	292 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SYCP2L	Q5T4T6	812 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	BTBD8	Q5XKL5	378 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	ITPRIPL1	Q6GPH6	555 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	GPR153	Q6NV75	609 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	DENND5B	Q6ZUT9	1274 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SLC24A5	Q71RS6	500 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006		Q7L0L9	218 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	TRABD2A	Q86V40	505 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SCN4B	Q8IWT1	228 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	CNPY4	Q8N129	248 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	C3orf58	Q8NDZ4	430 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	MCU	Q8NE86	351 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	GSTCD	Q8NEC7	633 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	NDRG1	Q92597	394 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	ALKBH8	Q96BT7	664 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SEC16B	Q96JE7	1060 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	TGS1	Q96RS0	853 aa	Known RBP	11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	SEZ6L	Q9BYH1	1024 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	BRD8	Q9H0E9	1235 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCDC134	Q9H6E4	229 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	PNPLA8	Q9NP80	782 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	TMEM51	Q9NW97	253 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006	MIOS	Q9NXC5	875 aa		11.11	□□□□□ -0.63
SPIDR-222	ENST00000524006		A0A1W2PQ45	241 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006		A0A1W2PQY0	241 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	C5orf60	A6NFR6	353 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	YJEFN3	A6XGL0	299 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	TCP11X1	B4DZS4	312 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006		E7ENQ6	273 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006		M0QZQ0	153 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	KRT37	O76014	449 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	SUN1	O94901	812 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	MT-ND3	P03897	115 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	DRD4	P21917	467 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	IL4R	P24394	825 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	NDUFV1	P49821	464 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	CDK16	Q00536	496 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	SCAP	Q12770	1279 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	PRPSAP1	Q14558	356 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ITIH4	Q14624	930 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	NFE2	Q16621	373 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRRC26	Q2I0M4	334 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	PAQR9	Q6ZVX9	377 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRRC8D	Q7L1W4	858 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	TDH	Q8IZJ6	230 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	PYROXD2	Q8N2H3	581 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ARHGAP18	Q8N392	663 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	DEFB123	Q8N688	67 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ADAM32	Q8TC27	787 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	LRRC8C	Q8TDW0	803 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	DEPDC1B	Q8WUY9	529 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	PPM1E	Q8WY54	764 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	EDEM1	Q92611	657 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	CDKL2	Q92772	493 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	MAGEB18	Q96M61	343 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	WDCP	Q9H6R7	721 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	USP29	Q9HBJ7	922 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ETNK1	Q9HBU6	452 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	MLXIPL	Q9NP71	852 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	EIF2B3	Q9NR50	452 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	RGS18	Q9NS28	235 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	PIGV	Q9NUD9	493 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	ABI2	Q9NYB9	513 aa	Predicted RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	DTL	Q9NZJ0	730 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	RABGEF1	Q9UJ41	708 aa		11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.1	□□□□□ -0.63
SPIDR-222	ENST00000524006	TCRBV7S3A2	A0A539	114 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	MYO1C	O00159	1063 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	NRP1	O14786	923 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	TRIM66	O15016	1216 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	PRPF4	O43172	522 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	1e-8	■■■■■ 32.2
SPIDR-222	ENST00000524006	HOXA2	O43364	376 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	SPAG7	O75391	227 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	TADA2A	O75478	443 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	SRGAP2B	P0DMP2	458 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	SELP	P16109	830 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	ADRA1B	P35368	520 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	MAGEA6	P43360	314 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	CORO7	P57737	925 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	GAD2	Q05329	585 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	IFT88	Q13099	833 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	MTM1	Q13496	603 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	SEMA5A	Q13591	1074 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	PAFAH1B3	Q15102	231 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	TRIM71	Q2Q1W2	868 aa	Known RBP	11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	SLC39A12	Q504Y0	691 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	RAB41	Q5JT25	222 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	ANKRD20A2	Q5SQ80	823 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	ANKRD20A1	Q5TYW2	823 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	ANKRD20A3	Q5VUR7	823 aa		11.09	□□□□□ -0.63
SPIDR-222	ENST00000524006	KIAA0319	Q5VV43	1072 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms