RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 ZNF528Q3MIS6 628 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 TANGO2Q6ICL3 276 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 FSTL4Q6MZW2 842 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 PDXDC1Q6P996 788 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 ZNF852Q6ZMS4 543 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 CATSPER3Q86XQ3 398 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 PASD1Q8IV76 773 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 GPR65Q8IYL9 337 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 MCPH1Q8NEM0 835 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 WASF1Q92558 559 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 DDX23Q9BUQ8 820 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 NFKBIZQ9BYH8 718 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 TM6SF1Q9BZW5 370 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 C2orf40Q9H1Z8 148 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 FZD8Q9H461 694 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 BRD9Q9H8M2 597 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 GOLGA2P5Q9HBQ8 144 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 ACSS2Q9NR19 701 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 SPTLC3Q9NUV7 552 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 ZSCAN32Q9NX65 697 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 DLL3Q9NYJ7 618 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 MTRRQ9UBK8 725 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 GMEB2Q9UKD1 530 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 MRPS17Q9Y2R5 130 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 PCDHGA2Q9Y5H1 932 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 CEP250Q9BV73 2442 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 OTOGLQ3ZCN5 2332 aa5.73□□□□□ -1.49
CTNNA1-239ENST00000523685 ZNF292O60281 2723 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 DOCK8Q8NF50 2099 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ACOT7O00154 380 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ACKR2O00590 384 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 DVL2O14641 736 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 TRAPPC3O43617 180 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 MED24O75448 989 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ECI2O75521 394 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 C4BPAP04003 597 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 CYP17A1P05093 508 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 EDN1P05305 212 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 HARSP12081 509 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 FDPSP14324 419 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 PTPN2P17706 415 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 SLC9A1P19634 815 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 MAGEA9P43362 315 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 KIF11P52732 1056 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ATXN1P54253 815 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ROR1Q01973 937 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 GUCY1B3Q02153 619 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 MTAPQ13126 283 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 TRIM29Q14134 588 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 NAB2Q15742 525 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 DCAF4L1Q3SXM0 396 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ATP13A4Q4VNC1 1196 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 FAM78AQ5JUQ0 283 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ATF7IP2Q5U623 682 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 RNF219Q5W0B1 726 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 CC2D1AQ6P1N0 951 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ZC3H18Q86VM9 953 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 DIS3L2Q8IYB7 885 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 KIAA1958Q8N8K9 716 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 FBXO15Q8NCQ5 510 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 TCEAL4Q96EI5 215 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 IFT74Q96LB3 600 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 NELL2Q99435 816 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 OSBPL6Q9BZF3 934 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 RNF38Q9H0F5 515 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 TMEM60Q9H2L4 133 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 PCIF1Q9H4Z3 704 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 CYP4F11Q9HBI6 524 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 ZFP14Q9HCL3 533 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 HSPBP1Q9NZL4 362 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 H2AFY2Q9P0M6 372 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 MBD1Q9UIS9 605 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 RAB23Q9ULC3 237 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 APOBEC2Q9Y235 224 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 SPO11Q9Y5K1 396 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 CACNA1IQ9P0X4 2223 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 SPTBN2O15020 2390 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 WDR87Q6ZQQ6 2873 aa5.72□□□□□ -1.49
CTNNA1-239ENST00000523685 DNAH14Q0VDD8 3507 aa5.71□□□□□ -1.49
CTNNA1-239ENST00000523685 ZMYM2Q9UBW7 1377 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 SMIM28A0A1B0GU29 152 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 WDR27A2RRH5 827 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 PRAMEF25A6NGN4 478 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 CCDC169A6NNP5 214 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 PRR5-ARHGAP8B1AHC4 643 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 PODXLO00592 558 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 GPR39O43194 453 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 TBC1D4O60343 1298 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 JAK2O60674 1132 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 SEMA7AO75326 666 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 LARGE1O95461 756 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 SEC24AO95486 1093 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 MYL4P12829 197 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 XRCC6P12956 609 aaKnown RBP eCLIP5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 GJA1P17302 382 aa5.71□□□□□ -1.5
CTNNA1-239ENST00000523685 PFKLP17858 780 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms