RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ARHGAP17Q68EM7 881 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 CHST9Q7L1S5 443 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 ZC3H3Q8IXZ2 948 aaKnown RBP23.74■■□□□ 1.39
PVT1-218ENST00000523328 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.74■■□□□ 1.39
PVT1-218ENST00000523328 WFIKKN2Q8TEU8 576 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 NDRG1Q92597 394 aaKnown RBP23.74■■□□□ 1.39
PVT1-218ENST00000523328 SEMA4DQ92854 862 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 TMEM176AQ96HP8 235 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 ORAI3Q9BRQ5 295 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 BTBD1Q9H0C5 482 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 TMEM8AQ9HCN3 771 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 PRSS16Q9NQE7 514 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 STOML2Q9UJZ1 356 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 PLA2G4CQ9UP65 541 aa23.74■■□□□ 1.39
PVT1-218ENST00000523328 A0A087WV48 116 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 H0Y8X5 98 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 ZBED1O96006 694 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 CD27P26842 260 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 RPS14P62263 151 aaKnown RBP23.73■■□□□ 1.39
PVT1-218ENST00000523328 FMNL3Q8IVF7 1028 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 SCUBE3Q8IX30 993 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 FAM186BQ8IYM0 893 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 ANKRD52Q8NB46 1076 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 CCDC150Q8NCX0 1101 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 FAXDC2Q96IV6 333 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 ULBP1Q9BZM6 244 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 FBRSQ9HAH7 460 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 CISHQ9NSE2 258 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 ABCB8Q9NUT2 735 aa23.73■■□□□ 1.39
PVT1-218ENST00000523328 COL5A1P20908 1838 aaPredicted RBP23.73■■□□□ 1.39
PVT1-218ENST00000523328 TULP2O00295 520 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 F13A1P00488 732 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 ZSCAN22P10073 491 aaPredicted RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 KRT13P13646 458 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 CTSKP43235 329 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 HARS2P49590 506 aaKnown RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 MCCD1P59942 119 aaPredicted RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 ZBTB16Q05516 673 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 TTC39CQ8N584 583 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 PDCD7Q8N8D1 485 aaKnown RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 CRELD1Q96HD1 420 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 OLA1Q9NTK5 396 aaKnown RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 GGA2Q9UJY4 613 aa23.72■■□□□ 1.39
PVT1-218ENST00000523328 HBS1LQ9Y450 684 aaKnown RBP23.72■■□□□ 1.39
PVT1-218ENST00000523328 SHROOM3Q8TF72 1996 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 PAPSS1O43252 624 aaPredicted RBP23.71■■□□□ 1.39
PVT1-218ENST00000523328 FSBPO95073 299 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 DNTTP04053 509 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 MYL1P05976 194 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 PABPC1P11940 636 aaKnown RBP23.71■■□□□ 1.39
PVT1-218ENST00000523328 ZNF445P59923 1031 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 KRT39Q6A163 491 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 ATL3Q6DD88 541 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 AHI1Q8N157 1196 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 TMA16Q96EY4 203 aaKnown RBP23.71■■□□□ 1.39
PVT1-218ENST00000523328 SGK2Q9HBY8 427 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 SFMBT1Q9UHJ3 866 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 RCOR1Q9UKL0 485 aa23.71■■□□□ 1.39
PVT1-218ENST00000523328 IGHV4-34P06331 123 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 DLDP09622 509 aaKnown RBP23.7■■□□□ 1.38
PVT1-218ENST00000523328 GTF2H1P32780 548 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 PSMC2P35998 433 aaKnown RBP23.7■■□□□ 1.38
PVT1-218ENST00000523328 SGSHP51688 502 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 ADGRF1Q5T601 910 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 MBLAC2Q68D91 279 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 DHRS13Q6UX07 377 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 WFDC5Q8TCV5 224 aa23.7■■□□□ 1.38
PVT1-218ENST00000523328 XPO1O14980 1071 aaKnown RBP23.69■■□□□ 1.38
PVT1-218ENST00000523328 RHOBTB3O94955 611 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 LATS1O95835 1130 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 PFKFB1P16118 471 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 BCAT1P54687 386 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 SLC8A3P57103 927 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 IL9RQ01113 521 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 TTC31Q49AM3 519 aaPredicted RBP23.69■■□□□ 1.38
PVT1-218ENST00000523328 CCDC157Q569K6 752 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 MAPK8IP1Q9UQF2 711 aa23.69■■□□□ 1.38
PVT1-218ENST00000523328 HELZ2Q9BYK8 2649 aaKnown RBP23.68■■□□□ 1.38
PVT1-218ENST00000523328 A0A1B0GVL5 298 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 E9PAM4 449 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 DNM1Q05193 864 aaKnown RBP23.68■■□□□ 1.38
PVT1-218ENST00000523328 ADAM9Q13443 819 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 GOLGA7BQ2TAP0 167 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 BSPRYQ5W0U4 402 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 ZNF776Q68DI1 518 aaPredicted RBP23.68■■□□□ 1.38
PVT1-218ENST00000523328 ADAT2Q7Z6V5 191 aaKnown RBP23.68■■□□□ 1.38
PVT1-218ENST00000523328 FBXL13Q8NEE6 735 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 ENGASEQ8NFI3 743 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 RNF139Q8WU17 664 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 EDEM1Q92611 657 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 GOLGA1Q92805 767 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 TATDN2Q93075 761 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 MYO19Q96H55 970 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 MTG2Q9H4K7 406 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 RAB20Q9NX57 234 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 FTSJ1Q9UET6 329 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 USP25Q9UHP3 1055 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 TSPAN16Q9UKR8 245 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 CFAP45Q9UL16 551 aa23.68■■□□□ 1.38
PVT1-218ENST00000523328 HPSEQ9Y251 543 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms