RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 IMPACTQ9P2X3 320 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 EVLQ9UI08 416 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 NPFFR2Q9Y5X5 522 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 HELZP42694 1942 aaKnown RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 ZNF638Q14966 1978 aaKnown RBP6.89□□□□□ -1.31
VPS13B-211ENST00000522802 CITO14578 2027 aa6.89□□□□□ -1.31
VPS13B-211ENST00000522802 PTPN13Q12923 2485 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 GON4LQ3T8J9 2241 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 SHROOM3Q8TF72 1996 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 CEP192Q8TEP8 1941 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 ANK1P16157 1881 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 A0A087WWV3 80 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 TRDMT1O14717 391 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 N4BP3O15049 544 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PRPF3O43395 683 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 TRAPPC3O43617 180 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 USO1O60763 962 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 CPA1P15085 419 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 ARSAP15289 507 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PNLIPP16233 465 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PRKCAP17252 672 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 CDR1P51861 262 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 RCAN1P53805 252 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 LMAN2Q12907 356 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PRPF4BQ13523 1007 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 LAPTM5Q13571 262 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 INF2Q27J81 1249 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 C2orf27AQ580R0 203 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 FAM209AQ5JX71 171 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 GPR158Q5T848 1215 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 ANO7Q6IWH7 933 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 MOXD1Q6UVY6 613 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 MAEAQ7L5Y9 396 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 SYT13Q7L8C5 426 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 OTUD6AQ7L8S5 288 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 FRMD1Q8N878 549 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PNPLA1Q8N8W4 532 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 MDGA1Q8NFP4 955 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 BEST2Q8NFU1 509 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 TSTD1Q8NFU3 115 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 HAS1Q92839 578 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 KISS1RQ969F8 398 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 UROC1Q96N76 676 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 ZMAT2Q96NC0 199 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 CAMK1GQ96NX5 476 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 KIFC3Q9BVG8 833 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 SLC26A6Q9BXS9 759 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 GPR88Q9GZN0 384 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 FZD8Q9H461 694 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
VPS13B-211ENST00000522802 CCL26Q9Y258 94 aa6.88□□□□□ -1.31
VPS13B-211ENST00000522802 TRBV23-1A0A0A0MS06 115 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 SMIM28A0A1B0GU29 152 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 H0Y626 953 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 H7C4K7 107 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 SYN3O14994 580 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 DKC1O60832 514 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 TRIM16O95361 564 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 CFIP05156 583 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 MSL3P1P0C860 447 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 GABRR2P28476 465 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 RARRES1P49788 294 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 GALK1P51570 392 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 NLRP5P59047 1200 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 RUNX3Q13761 415 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 EPHA7Q15375 998 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 NTRK3Q16288 839 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 FAM187BQ17R55 369 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 ZNF280DQ6N043 979 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 CCNI2Q6ZMN8 369 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 RASSF3Q86WH2 238 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 TPH2Q8IWU9 490 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 PPIL6Q8IXY8 311 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 TMEFF1Q8IYR6 380 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 RLN3Q8WXF3 142 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 DIO2Q92813 273 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 C18orf25Q96B23 403 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 EXOC2Q96KP1 924 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 AIFM3Q96NN9 605 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 FNBP1Q96RU3 617 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 DHRS4Q9BTZ2 278 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 GTPBP2Q9BX10 602 aaKnown RBP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 RNF26Q9BY78 433 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 NCOA5Q9HCD5 579 aaKnown RBP6.87□□□□□ -1.31
VPS13B-211ENST00000522802 GKN1Q9NS71 199 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
VPS13B-211ENST00000522802 NPHS1O60500 1241 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 SLITRK3O94933 977 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 FTH1P19P0C7X4 201 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 CD59P13987 128 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 HNRNPLP14866 589 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS13B-211ENST00000522802 ATF6P18850 670 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 OSTNP61366 133 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 KCNAB2Q13303 367 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 DCAF4L1Q3SXM0 396 aa6.86□□□□□ -1.31
VPS13B-211ENST00000522802 USP39Q53GS9 565 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms