RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 CHRNB2P17787 502 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 YWHAZP63104 245 aaKnown RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 UGT3A1Q6NUS8 523 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 P3H2Q8IVL5 708 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 SCUBE3Q8IX30 993 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 VPS37AQ8NEZ2 397 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 PPP2R3CQ969Q6 453 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CINPQ9BW66 212 aaPredicted RBP14.16□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF556Q9HAH1 456 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 WDR27A2RRH5 827 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 ALOX15BO15296 676 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 RBL1P28749 1068 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 ECHS1P30084 290 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 LHX1P48742 406 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 NOMO3P69849 1222 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 CDH17Q12864 832 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 AGKQ53H12 422 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 GRTP1Q5TC63 336 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 MIB1Q86YT6 1006 aa14.16□□□□□ -0.14
SYNPO-205ENST00000522122 DDHD2O94830 711 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 MGAT1P26572 445 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 CDC25CP30307 473 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 CLK1P49759 484 aaKnown RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 TAS2R40P59535 323 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 FUT11Q495W5 492 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 ZBTB49Q6ZSB9 765 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 PATL1Q86TB9 770 aaKnown RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 POU5F2Q8N7G0 328 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SEC14L1Q92503 715 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SEMA4DQ92854 862 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SLCO2A1Q92959 643 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 FAM192AQ9GZU8 254 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 APPL1Q9UKG1 709 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 AP4S1Q9Y587 144 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 A0A096LPK6 155 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SYNDIG1LA6NDD5 238 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 C5orf58C9J3I9 102 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 VPS26AO75436 327 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 TCEA3O75764 348 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 USP1O94782 785 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF23P17027 643 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 S100A5P33763 92 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SPIRE1Q08AE8 756 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 LRRC74AQ0VAA2 488 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 FKBP1CQ5VVH2 108 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 MICU2Q8IYU8 434 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SNX31Q8N9S9 440 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 OTUB1Q96FW1 271 aaPredicted RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SPATA17Q96L03 361 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 TRAPPC9Q96Q05 1148 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 PORCNQ9H237 461 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 C10orf88Q9H8K7 445 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 ARHGEF3Q9NR81 526 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SAE1Q9UBE0 346 aaPredicted RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SIGLEC16A6NMB1 481 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 WNT10BO00744 389 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 UBDO15205 165 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 PGAM1P18669 254 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 YY1P25490 414 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 CHRNB3Q05901 458 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 ARHGEF7Q14155 803 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 NET1Q7Z628 596 aaPredicted RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 REPS2Q8NFH8 660 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 OSMRQ99650 979 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 ZNF184Q99676 751 aaPredicted RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 NRDE2Q9H7Z3 1164 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 DYRK4Q9NR20 520 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 DDX28Q9NUL7 540 aaKnown RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 RBM22Q9NW64 420 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SNTG2Q9NY99 539 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 CRLS1Q9UJA2 301 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 hCG_1818297A0A087WSY0 165 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 KCNK1O00180 336 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 STRNO43815 780 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 AHCYL1O43865 530 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 THP07101 528 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 TDRD10Q5VZ19 366 aaKnown RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 KYAT3Q6YP21 454 aaKnown RBP14.15□□□□□ -0.14
SYNPO-205ENST00000522122 GPR141Q7Z602 305 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 HELQQ8TDG4 1101 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 SYTL2Q9HCH5 934 aa14.15□□□□□ -0.14
SYNPO-205ENST00000522122 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ALDH1A1P00352 501 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 SLC6A3Q01959 620 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 TTLL9Q3SXZ7 439 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 OTOAQ7RTW8 1153 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 CCDC60Q8IWA6 550 aaPredicted RBP14.14□□□□□ -0.15
SYNPO-205ENST00000522122 LRP5O75197 1615 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 HEATR9A2RTY3 570 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 E5RJQ4 531 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 GLRA2P23416 452 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ZCCHC23Q6ZST2 131 aa14.14□□□□□ -0.15
SYNPO-205ENST00000522122 ST6GALNAC4Q9H4F1 302 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms