RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SCNN1BP51168 640 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 GRIK3Q13003 919 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 MROH9Q5TGP6 573 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ABHD15Q6UXT9 468 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 DSG4Q86SJ6 1040 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 SCUBE3Q8IX30 993 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ULBP1Q9BZM6 244 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 UTP6Q9NYH9 597 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 MAP2K7O14733 419 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ENDOD1O94919 500 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ATP5BP06576 529 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 PSEN1P49768 467 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 POU4F1Q01851 419 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 PPP3CAQ08209 521 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 PKN3Q6P5Z2 889 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 GPR20Q99678 358 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 MAGEB16A2A368 324 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 LRRC10BA6NIK2 292 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CES2O00748 559 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 THRAP10827 490 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 WEE1P30291 646 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 ATP5C1P36542 298 aaKnown RBP16.59■□□□□ 0.25
USP42-207ENST00000521713 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 CCDC126Q96EE4 140 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 FICDQ9BVA6 458 aa16.59■□□□□ 0.25
USP42-207ENST00000521713 SAC3D1A6NKF1 404 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 AHCYL1O43865 530 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 NOS2P35228 1153 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 NCKAP1LP55160 1127 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 BTKQ06187 659 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 FUT2Q10981 343 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 EIF2B5Q13144 721 aaKnown RBP16.58■□□□□ 0.25
USP42-207ENST00000521713 USP41Q3LFD5 358 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 C6orf10Q5SRN2 563 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 ILDR2Q71H61 639 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 WWOXQ9NZC7 414 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 MARCH2Q9P0N8 246 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 BTBD7Q9P203 1132 aa16.58■□□□□ 0.25
USP42-207ENST00000521713 TRPC5OSA6NMA1 111 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
USP42-207ENST00000521713 EVX2Q03828 476 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 SLC34A1Q06495 639 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 CROCCP3Q8IVE0 287 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 VPS37AQ8NEZ2 397 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 PCDH9Q9HC56 1237 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 NMRK1Q9NWW6 199 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 ASTN2O75129 1339 aaPredicted RBP16.58■□□□□ 0.24
USP42-207ENST00000521713 ADH1AP07327 375 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 MMP3P08254 477 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 NFICP08651 508 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 CSH1P0DML2 217 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 CSH2P0DML3 217 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 PPP3CCP48454 512 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
USP42-207ENST00000521713 HYIQ5T013 277 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 ERAP2Q6P179 960 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 C12orf42Q96LP6 360 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 SYTL2Q9HCH5 934 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 ZMYND8Q9ULU4 1186 aaPredicted RBP16.58■□□□□ 0.24
USP42-207ENST00000521713 IFT172Q9UG01 1749 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 NPR3P17342 541 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 PAX7P23759 505 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 FBXW4P57775 412 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 FOXR2Q6PJQ5 311 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 TRIM63Q969Q1 353 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 SPATA17Q96L03 361 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 CNGB3Q9NQW8 809 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 MARCOQ9UEW3 520 aaPredicted RBP16.58■□□□□ 0.24
USP42-207ENST00000521713 TAGLN3Q9UI15 199 aa16.58■□□□□ 0.24
USP42-207ENST00000521713 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.57■□□□□ 0.24
USP42-207ENST00000521713 TISP43B9A030 160 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 ALDH1A2O94788 518 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 ZCCHC18P0CG32 403 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 CTNNB1P35222 781 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 CASP5P51878 434 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 HELQQ8TDG4 1101 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 TMEM121Q9BTD3 319 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 MMADHCQ9H3L0 296 aaPredicted RBP16.57■□□□□ 0.24
USP42-207ENST00000521713 NMRK2Q9NPI5 230 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 HES2Q9Y543 173 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 E5RJQ4 531 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.249e-7■■■□□ 18.6
USP42-207ENST00000521713 CCDC130P13994 396 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 IZUMO2Q6UXV1 221 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 ARID3BQ8IVW6 561 aaPredicted RBP16.57■□□□□ 0.24
USP42-207ENST00000521713 MICU2Q8IYU8 434 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 COLGALT1Q8NBJ5 622 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 FBXO36Q8NEA4 188 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 CSGALNACT1Q8TDX6 532 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 LENG9Q96B70 501 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 VAT1Q99536 393 aa16.57■□□□□ 0.24
USP42-207ENST00000521713 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms