RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 XPO1O14980 1071 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 NPC1O15118 1278 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 CETN3O15182 167 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TIMM44O43615 452 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 IGLV3-19P01714 112 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ATXN1LP0C7T5 689 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 EPB41P11171 864 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 ACADMP11310 421 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 LCP1P13796 627 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 CD19P15391 556 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 CD70P32970 193 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 PRCPP42785 496 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 HARS2P49590 506 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 RGS7P49802 495 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ZNF132P52740 706 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 PMS1P54277 932 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 ARID5AQ03989 594 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ADIGQ0VDE8 80 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 PNOCQ13519 176 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 CAMK2GQ13555 558 aaPredicted RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 CUL2Q13617 745 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 HNRNPDQ14103 355 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 PTPRNQ16849 979 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 KIF19Q2TAC6 998 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 EDRF1Q3B7T1 1238 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 FNDC3BQ53EP0 1204 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 MPPE1Q53F39 396 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 DCAF17Q5H9S7 520 aaPredicted RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 KCNT1Q5JUK3 1230 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ANKRD40Q6AI12 368 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 RFWD3Q6PCD5 774 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 LAYNQ6UX15 382 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 CCNI2Q6ZMN8 369 aaPredicted RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 CHST9Q7L1S5 443 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 OR2T3Q8NH03 318 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 WFDC5Q8TCV5 224 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TFAP2BQ92481 460 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 SNX19Q92543 992 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 PLD4Q96BZ4 506 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TMA16Q96EY4 203 aaKnown RBP9.52□□□□□ -0.89
CDH17-204ENST00000520952 MYEOVQ96EZ4 313 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 SLC2A11Q9BYW1 496 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ZDHHC5Q9C0B5 715 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 DNAI2Q9GZS0 605 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TMEM245Q9H330 911 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 PRSS16Q9NQE7 514 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 TM7SF3Q9NS93 570 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ABCB8Q9NUT2 735 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 BTBD3Q9Y2F9 522 aa9.52□□□□□ -0.89
CDH17-204ENST00000520952 ASXL3Q9C0F0 2248 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 A0A1W2PQ27 194 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 A0A1W2PQ64 194 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 TBL1XO60907 577 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 MATKP42679 507 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 BCAT1P54687 386 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 SLC8A3P57103 927 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 RPS14P62263 151 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 BST2Q10589 180 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 PKDCCQ504Y2 493 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 SGO2Q562F6 1265 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 ADGRF1Q5T601 910 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 MBLAC2Q68D91 279 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 PMF1Q6P1K2 205 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 DBX2Q6ZNG2 339 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 KIAA0907Q7Z7F0 614 aaPredicted RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 PROSER1Q86XN7 944 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 TTC39CQ8N584 583 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 UBR7Q8N806 425 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 MDM1Q8TC05 714 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 CLEC4CQ8WTT0 213 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 RNF139Q8WU17 664 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 KAT5Q92993 513 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 FAXDC2Q96IV6 333 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 IPO9Q96P70 1041 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 LHX5Q9H2C1 402 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 TOR4AQ9NXH8 423 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 STIM2Q9P246 746 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDH17-204ENST00000520952 PLA2G4CQ9UP65 541 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 COQ4Q9Y3A0 265 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 HBS1LQ9Y450 684 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 NFE2L3Q9Y4A8 694 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 SNX11Q9Y5W9 270 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 PTPRBP23467 1997 aa9.51□□□□□ -0.89
CDH17-204ENST00000520952 SMG1Q96Q15 3661 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 URB1O60287 2271 aaKnown RBP9.51□□□□□ -0.89
CDH17-204ENST00000520952 TRIM49BA6NDI0 452 aa9.5□□□□□ -0.89
CDH17-204ENST00000520952 O00370 1275 aa9.5□□□□□ -0.89
CDH17-204ENST00000520952 STX10O60499 249 aa9.5□□□□□ -0.89
CDH17-204ENST00000520952 FSBPO95073 299 aa9.5□□□□□ -0.89
CDH17-204ENST00000520952 VDRP11473 427 aa9.5□□□□□ -0.89
CDH17-204ENST00000520952 PABPC1P11940 636 aaKnown RBP9.5□□□□□ -0.89
CDH17-204ENST00000520952 SLC6A4P31645 630 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms