RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 RBM12Q9NTZ6 932 aaKnown RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■■■□ 19.5
TSNARE1-205ENST00000520166 CLDND1Q9NY35 253 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 PGRMC1O00264 195 aaKnown RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 CKMP06732 381 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 KLF1Q13351 362 aaPredicted RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 CTC1Q2NKJ3 1217 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 ODF2Q5BJF6 829 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 MS4A13Q5J8X5 152 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 BRMS1LQ5PSV4 323 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 RAP1GAP2Q684P5 730 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 RFWD3Q6PCD5 774 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 RFX6Q8HWS3 928 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 NOA1Q8NC60 698 aaKnown RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 C1orf54Q8WWF1 131 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 RBM41Q96IZ5 413 aaKnown RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 RNF157Q96PX1 679 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 NCAPGQ9BPX3 1015 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 C10orf88Q9H8K7 445 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 DPP7Q9UHL4 492 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 TTC7AQ9ULT0 858 aaPredicted RBP17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 NEU3Q9UQ49 428 aa17.61■□□□□ 0.41
TSNARE1-205ENST00000520166 CST8O60676 142 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 LRIG2O94898 1065 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 PAPLNO95428 1278 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 PRAMEF12O95522 483 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 CORO1AP31146 461 aaKnown RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 SLC6A4P31645 630 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 CCDC85BQ15834 202 aaPredicted RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 PRELID2Q8N945 189 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 SPATA4Q8NEY3 305 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 PPP2R3CQ969Q6 453 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 GCNAQ96QF7 691 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 CDK5RAP1Q96SZ6 601 aaKnown RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 HINFPQ9BQA5 517 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 S1PR5Q9H228 398 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 MRPS23Q9Y3D9 190 aaKnown RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 HBS1LQ9Y450 684 aaKnown RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 V9GYY5 206 aaPredicted RBP17.6■□□□□ 0.41
TSNARE1-205ENST00000520166 KRIT1O00522 736 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 PECAM1P16284 738 aaPredicted RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 SGSHP51688 502 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 MLLT6P55198 1093 aaPredicted RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 NNTQ13423 1086 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 PDK2Q15119 407 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 FAM133BQ5BKY9 247 aaKnown RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 C1orf228Q6PIY5 440 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 TADA2BQ86TJ2 420 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 CIR1Q86X95 450 aaPredicted RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 ZNF683Q8IZ20 524 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 CMTM8Q8IZV2 173 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 MYLIPQ8WY64 445 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 USP13Q92995 863 aaPredicted RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 IGSF8Q969P0 613 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 LRRC3BQ96PB8 259 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 HAPLN3Q96S86 360 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 EPC1Q9H2F5 836 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 TASP1Q9H6P5 420 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 LMCD1Q9NZU5 365 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 MPP6Q9NZW5 540 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 AGO1Q9UL18 857 aaKnown RBP17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 VANGL2Q9ULK5 521 aa17.59■□□□□ 0.41
TSNARE1-205ENST00000520166 TRAV19A0A0A6YYK7 116 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 POU2F2P09086 479 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 PAFAH1B1P43034 410 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 NUMBP49757 651 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 VCPP55072 806 aaKnown RBP17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 COG7P83436 770 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 SLC10A2Q12908 348 aaPredicted RBP17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 SNX1Q13596 522 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 AUHQ13825 339 aaKnown RBP17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 DPYSQ14117 519 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 RFX8Q6ZV50 586 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 PLD5Q8N7P1 536 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 FAF2Q96CS3 445 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 PRMT1Q99873 361 aaKnown RBP17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 OSBPL2Q9H1P3 480 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 NDFIP2Q9NV92 336 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 CFAP97Q9P2B7 532 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 BRWD1Q9NSI6 2320 aa17.58■□□□□ 0.41
TSNARE1-205ENST00000520166 TMEM265A0A087WTH1 108 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 LEFTY2O00292 366 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 EEF2KO00418 725 aaKnown RBP17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 CNTN5O94779 1100 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 APOEP02649 317 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 POU3F3P20264 500 aaPredicted RBP17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 KCNJ1P48048 391 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 COPS2P61201 443 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 SLC7A9P82251 487 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 RING1Q06587 406 aa17.58■□□□□ 0.4
TSNARE1-205ENST00000520166 PPP2R5EQ16537 467 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms