RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 UBL4BQ8N7F7 174 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 MYRIPQ8NFW9 859 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ZNF564Q8TBZ8 553 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ACTRT1Q8TDG2 376 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 KCNV2Q8TDN2 545 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 IPO4Q8TEX9 1081 aaKnown RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 OSCP1Q8WVF1 389 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 IRGQQ8WZA9 623 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 FAM3CQ92520 227 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 RUBCNQ92622 972 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ATP2A3Q93084 1043 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 FAM149B1Q96BN6 582 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ZNF653Q96CK0 615 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CPXM1Q96SM3 734 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 NUP85Q9BW27 656 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 KLF16Q9BXK1 252 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 TLR10Q9BXR5 811 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PACSIN1Q9BY11 444 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 IRX2Q9BZI1 471 aaPredicted RBP7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CNGB3Q9NQW8 809 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 RASAL2Q9UJF2 1139 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 EFR3BQ9Y2G0 817 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 SH3BP1Q9Y3L3 701 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 SIT1Q9Y3P8 196 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 HYOU1Q9Y4L1 999 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 PCDHA3Q9Y5H8 950 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 ALG6Q9Y672 507 aa7.9□□□□□ -1.14
SDCBP-206ENST00000519115 CACNA1GO43497 2377 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 E2F8A0AVK6 867 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 FAM170BA6NMN3 283 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 EFCAB8A8MWE9 144 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CTIFO43310 598 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 MSI1O43347 362 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 BUB1BO60566 1050 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 STC2O76061 302 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 URI1O94763 535 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 SLU7O95391 586 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 MOCS3O95396 460 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 LTFP02788 710 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CYP17A1P05093 508 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 KRT3P12035 628 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 GLULP15104 373 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 PCK1P35558 622 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CETN2P41208 172 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 PAFAH1B1P43034 410 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 COPS2P61201 443 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 GLE1Q53GS7 698 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 EFHC1Q5JVL4 640 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 ACBD5Q5T8D3 534 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 BSPRYQ5W0U4 402 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF852Q6ZMS4 543 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 SLC26A9Q7LBE3 791 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 RALGPS2Q86X27 583 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 BBS7Q8IWZ6 715 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 SCUBE3Q8IX30 993 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 RASGEF1CQ8N431 466 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF276Q8N554 614 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 RNF139Q8WU17 664 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 MAIP1Q8WWC4 291 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CD101Q93033 1021 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CHFRQ96EP1 664 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 PIWIL1Q96J94 861 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 C8orf33Q9H7E9 229 aaPredicted RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 ECT2Q9H8V3 914 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 RBM12Q9NTZ6 932 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CLIC5Q9NZA1 410 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 MARCH2Q9P0N8 246 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 TRIM10Q9UDY6 481 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 MRPS17Q9Y2R5 130 aaKnown RBP7.89□□□□□ -1.15
SDCBP-206ENST00000519115 HCN4Q9Y3Q4 1203 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 CAPN6Q9Y6Q1 641 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 FANCMQ8IYD8 2048 aa7.89□□□□□ -1.15
SDCBP-206ENST00000519115 A0A0U1RQJ8 604 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 SLC12A8A0AV02 714 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 TMCO5BA8MYB1 307 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF487B1APH4 448 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 MAN2B1O00754 1011 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-206ENST00000519115 PAPSS1O43252 624 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-206ENST00000519115 PSTPIP1O43586 416 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 GREM1O60565 184 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 ENDOD1O94919 500 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 NFATC1O95644 943 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 ABCB4P21439 1286 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 RRM1P23921 792 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 GJA4P35212 333 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 CTNNA1P35221 906 aaKnown RBP7.88□□□□□ -1.15
SDCBP-206ENST00000519115 PTPN9P43378 593 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 PEX5P50542 639 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF135P52742 658 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-206ENST00000519115 ZNF143P52747 638 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-206ENST00000519115 AIF1P55008 147 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 SLC6A3Q01959 620 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 MTA1Q13330 715 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 GAB4Q2WGN9 574 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 PTPN20Q4JDL3 420 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 BOLA3Q53S33 107 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 LY6G5CQ5SRR4 150 aa7.88□□□□□ -1.15
SDCBP-206ENST00000519115 DNAJC24Q6P3W2 148 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms