RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 TBC1D3IA0A087WXS9 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3EA0A087X179 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3KA0A087X1G2 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3BA6NDS4 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3FA6NER0 549 aaPredicted RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3LB9A6J9 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 E7EVH7 732 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SEPT4O43236 478 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 HNRNPRO43390 633 aaKnown RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3HP0C7X1 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 IGFBP2P18065 325 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SFPQP23246 707 aaKnown RBP eCLIP5.07□□□□□ -1.6
SQLE-202ENST00000518604 CYP3A7P24462 503 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SLC8A1P32418 973 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 GRK5P34947 590 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 HOXD12P35452 270 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 PCP4P48539 62 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 FOXL2P58012 376 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 NHLH1Q02575 133 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 CUL4BQ13620 913 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 GALNTL6Q49A17 601 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3GQ6DHY5 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3CQ6IPX1 549 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 CYP26C1Q6V0L0 522 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 KYAT3Q6YP21 454 aaKnown RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 RRAGAQ7L523 313 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 RASGRP2Q7LDG7 609 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 ANKS1BQ7Z6G8 1248 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 HERC6Q8IVU3 1022 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TBC1D3Q8IZP1 549 aaPredicted RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 ADPRHL1Q8NDY3 354 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 SLC2A12Q8TD20 617 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 ASB12Q8WXK4 309 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 TRMT61AQ96FX7 289 aaKnown RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 P2RY11Q96G91 374 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 ZNF845Q96IR2 970 aaPredicted RBP5.07□□□□□ -1.6
SQLE-202ENST00000518604 SENP7Q9BQF6 1050 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 ELOVL1Q9BW60 279 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 ABHD16BQ9H3Z7 469 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.07□□□□□ -1.6
SQLE-202ENST00000518604 SLC12A4Q9UP95 1085 aa5.07□□□□□ -1.6
SQLE-202ENST00000518604 AOX1Q06278 1338 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 TMEM232C9JQI7 657 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 M0QYT0 321 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 NPHP1O15259 732 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 NUDT3O95989 172 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 ALDOAP04075 364 aaKnown RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 AGTR2P50052 363 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 HMGA2P52926 109 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PRKAA2P54646 552 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 TUBA4AP68366 448 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 DCTN1Q14203 1278 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PFKFB3Q16875 520 aaPredicted RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 PROSER3Q2NL68 480 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 FBXO42Q6P3S6 717 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 RANBP10Q6VN20 620 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 SLC39A5Q6ZMH5 540 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PTF1AQ7RTS3 328 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 C16orf71Q8IYS4 520 aaPredicted RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 BOLLQ8N9W6 283 aaKnown RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 SEMA6DQ8NFY4 1073 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 AFG1LQ8WV93 481 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 GOLGA1Q92805 767 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 ASB2Q96Q27 587 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PIGSQ96S52 555 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PYM1Q9BRP8 204 aaKnown RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 NUAK2Q9H093 628 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 PGAP2Q9UHJ9 254 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 FEM1BQ9UK73 627 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 TRPC5Q9UL62 973 aaPredicted RBP5.06□□□□□ -1.6
SQLE-202ENST00000518604 GTF2A1LQ9UNN4 478 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 COX11Q9Y6N1 276 aa5.06□□□□□ -1.6
SQLE-202ENST00000518604 FAM90A20PA6NIJ5 464 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 SAC3D1A6NKF1 404 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 B9A039 149 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 SGPL1O95470 568 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 ENO1P06733 434 aaKnown RBP5.05□□□□□ -1.6
SQLE-202ENST00000518604 BMP5P22003 454 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 NDUFS1P28331 727 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 TAS2R50P59544 299 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 PRAMEF17Q5VTA0 474 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 CHSY1Q86X52 802 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 PRIMA1Q86XR5 153 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 C2CD5Q86YS7 1000 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 SUGP1Q8IWZ8 645 aaKnown RBP5.05□□□□□ -1.6
SQLE-202ENST00000518604 TMEM57Q8N5G2 664 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 PTGR2Q8N8N7 351 aaPredicted RBP5.05□□□□□ -1.6
SQLE-202ENST00000518604 FSIP1Q8NA03 581 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 ZNF398Q8TD17 642 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 HASPINQ8TF76 798 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 RITA1Q96K30 269 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 UBXN10Q96LJ8 280 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 TRIM2Q9C040 744 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 SFXN1Q9H9B4 322 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 NOD2Q9HC29 1040 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 ERVK-5Q9HDB9 667 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 RAB21Q9UL25 225 aa5.05□□□□□ -1.6
SQLE-202ENST00000518604 DERAQ9Y315 318 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms