RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 XYLT2Q9H1B5 865 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 TMEM245Q9H330 911 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 PABPC3Q9H361 631 aaKnown RBP9.32□□□□□ -0.92
PVT1-207ENST00000518528 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 PRSS16Q9NQE7 514 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 OSER1Q9NX31 292 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 FBXL12Q9NXK8 326 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 IL17BQ9UHF5 180 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 RASAL2Q9UJF2 1139 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 NUDT5Q9UKK9 219 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 AGO1Q9UL18 857 aaKnown RBP9.32□□□□□ -0.92
PVT1-207ENST00000518528 CEP192Q8TEP8 1941 aa9.32□□□□□ -0.92
PVT1-207ENST00000518528 PTPN13Q12923 2485 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 UNC79Q9P2D8 2635 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 FRMD3A2A2Y4 597 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 TLR4O00206 839 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 BEST1O76090 585 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 DLDP09622 509 aaKnown RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 POLR2EP19388 210 aaKnown RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 ADORA2BP29275 332 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 STAT6P42226 847 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 LSSP48449 732 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 HARS2P49590 506 aaKnown RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 CYP2J2P51589 502 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 GALCP54803 685 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 GABREP78334 506 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 DAB2P98082 770 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 SRSF1Q07955 248 aaKnown RBP eCLIP9.31□□□□□ -0.92
PVT1-207ENST00000518528 EFEMP1Q12805 493 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 NCOA4Q13772 614 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 SHBQ15464 509 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 KMT5BQ4FZB7 885 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 NCEH1Q6PIU2 408 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 XKR5Q6UX68 686 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 CHST9Q7L1S5 443 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 CCDC186Q7Z3E2 898 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 AHI1Q8N157 1196 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 CRYBG2Q8N1P7 616 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 RBBP8NLQ8NC74 664 aaPredicted RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 CYB5D2Q8WUJ1 264 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 SNRNP27Q8WVK2 155 aaKnown RBP9.31□□□□□ -0.92
PVT1-207ENST00000518528 TTC9Q92623 222 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 EPSTI1Q96J88 318 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 OMDQ99983 421 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 ORAI3Q9BRQ5 295 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 SEMA4CQ9C0C4 833 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 POLR1BQ9H9Y6 1135 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 NMUR1Q9HB89 426 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 MARCH2Q9P0N8 246 aa9.31□□□□□ -0.92
PVT1-207ENST00000518528 SLC12A8A0AV02 714 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
PVT1-207ENST00000518528 RNASEH2AO75792 299 aaKnown RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 KIF20AO95235 890 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 MPOP05164 745 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 PABPC1P11940 636 aaKnown RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 NUDT1P36639 197 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 KIF11P52732 1056 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 NDST1P52848 882 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 NXPH1P58417 271 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 OVGP1Q12889 678 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 ZNF211Q13398 564 aaPredicted RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 SGSM1Q2NKQ1 1148 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 SFMBT2Q5VUG0 894 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 TMEM215Q68D42 235 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 GPRIN1Q7Z2K8 1008 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 ZNF366Q8N895 744 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 MFSD2AQ8NA29 543 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 PLD4Q96BZ4 506 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 TMA16Q96EY4 203 aaKnown RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 ABCG4Q9H172 646 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 RSPH9Q9H1X1 276 aaPredicted RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 AGPAT3Q9NRZ7 376 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 CGNQ9P2M7 1197 aaKnown RBP9.3□□□□□ -0.92
PVT1-207ENST00000518528 GGA2Q9UJY4 613 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 FZD4Q9ULV1 537 aa9.3□□□□□ -0.92
PVT1-207ENST00000518528 A0A1W2PR77 199 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 EXOC3O60645 756 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 USP12O75317 370 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 WNT1P04628 370 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 RPN1P04843 607 aaKnown RBP9.29□□□□□ -0.92
PVT1-207ENST00000518528 SLFN14P0C7P3 912 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 HOXD9P28356 352 aaPredicted RBP9.29□□□□□ -0.92
PVT1-207ENST00000518528 HLA-FP30511 346 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 SLC8A3P57103 927 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 ASIC1P78348 528 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 AMPD3Q01432 767 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 BNIP3Q12983 259 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 CST6Q15828 149 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 MBLAC2Q68D91 279 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 ZNF574Q6ZN55 896 aaPredicted RBP9.29□□□□□ -0.92
PVT1-207ENST00000518528 ATG14Q6ZNE5 492 aa9.29□□□□□ -0.92
PVT1-207ENST00000518528 CLEC20AQ6ZU45 233 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms