RNA–Protein interactions for RNA: ENST00000515737.5

SH3BP2-228, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-228ENST00000515737 CCDC110Q8TBZ0 833 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 TMEM169Q96HH4 297 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 SPATA17Q96L03 361 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 QKIQ96PU8 341 aaKnown RBP eCLIP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 RC3H2Q9HBD1 1191 aaKnown RBP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 RAB6BQ9NRW1 208 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 ARHGEF38Q9NXL2 777 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 NR2E3Q9Y5X4 410 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 BACE2Q9Y5Z0 518 aa17.45■□□□□ 0.38
SH3BP2-228ENST00000515737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 EPHB2P29323 1055 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 RPL10AP62906 217 aaKnown RBP17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 TAF10Q12962 218 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 BRMS1LQ5PSV4 323 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 HP1BP3Q5SSJ5 553 aaPredicted RBP17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 OTOP2Q7RTS6 562 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 GIPC2Q8TF65 315 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 OSBPL2Q9H1P3 480 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 TLDC2A0PJX2 215 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 EFCAB14O75071 495 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 TERF2Q15554 542 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 HIF1AQ16665 826 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 SKIDA1Q1XH10 827 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 TP53INP2Q8IXH6 220 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 SLC39A11Q8N1S5 342 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 SERPINB11Q96P15 392 aa17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 XPO7Q9UIA9 1087 aaKnown RBP17.44■□□□□ 0.38
SH3BP2-228ENST00000515737 HMGB1P1B2RPK0 211 aaPredicted RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 TMEM63AO94886 807 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 SOD2P04179 222 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 SRGAP2BP0DMP2 458 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 ZNF135P52742 658 aaPredicted RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 FASTKD3Q14CZ7 662 aaKnown RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 PDK1Q15118 436 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 SYCP2LQ5T4T6 812 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 CENPUQ71F23 418 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 CCNYQ8ND76 341 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 CLSTN3Q9BQT9 956 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 PRDM12Q9H4Q4 367 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 MRPL42Q9Y6G3 142 aaKnown RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 PAGE1O75459 146 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 AP1B1Q10567 949 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 PPP2R5DQ14738 602 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 PDZD4Q76G19 769 aaPredicted RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 HTR3CQ8WXA8 447 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 HAPLN3Q96S86 360 aa17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 TLR8Q9NR97 1041 aaKnown RBP17.43■□□□□ 0.38
SH3BP2-228ENST00000515737 SMAPO00193 183 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 GCATO75600 419 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 TBX18O95935 607 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 VAV1P15498 845 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 ATF6P18850 670 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 ARL4CP56559 192 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 DNAJC21Q5F1R6 531 aaKnown RBP17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 FAXCQ5TGI0 409 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 RASIP1Q5U651 963 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 MSANTD2Q6P1R3 559 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 CMTR2Q8IYT2 770 aaKnown RBP17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 ZBED8Q8IZ13 594 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 YME1L1Q96TA2 773 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 MAGED2Q9UNF1 606 aaPredicted RBP17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 C5orf60A6NFR6 353 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 ALOX15BO15296 676 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 EFEMP1Q12805 493 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 MTM1Q13496 603 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 FNBP1LQ5T0N5 605 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 RWDD4Q6NW29 188 aaKnown RBP17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 KLC2Q9H0B6 622 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 CLIC5Q9NZA1 410 aa17.42■□□□□ 0.38
SH3BP2-228ENST00000515737 PPP1R12AO14974 1030 aaPredicted RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 BANF1O75531 89 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 MOCS2O96007 188 aaPredicted RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 LAG3P18627 525 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 SLCO1A2P46721 670 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 TUFMP49411 452 aaKnown RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 PSEN1P49768 467 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 KCNJ11Q14654 390 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 NPWQ8N729 165 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 COLGALT1Q8NBJ5 622 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 EPS8L3Q8TE67 593 aaKnown RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 FCRL2Q96LA5 508 aaPredicted RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 ETNK1Q9HBU6 452 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 SPG21Q9NZD8 308 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 TLR6Q9Y2C9 796 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 SHROOM3Q8TF72 1996 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 SLC38A8A6NNN8 435 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 KCNU1A8MYU2 1149 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 RASGRF2O14827 1237 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 CHADO15335 359 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 BAIAP3O94812 1187 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 GLUD2P49448 558 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 DSG1Q02413 1049 aa17.41■□□□□ 0.38
SH3BP2-228ENST00000515737 PRKD1Q15139 912 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms