RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 TRIP4Q15650 581 aaPredicted RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 INAVAQ3KP66 663 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 CHST9Q7L1S5 443 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 ADAT2Q7Z6V5 191 aaKnown RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 TTC39CQ8N584 583 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 TMEM176AQ96HP8 235 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 SGK2Q9HBY8 427 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 PRSS16Q9NQE7 514 aa16.45■□□□□ 0.22
LMNA-223ENST00000515459 OLA1Q9NTK5 396 aaKnown RBP16.45■□□□□ 0.22
LMNA-223ENST00000515459 GCN1Q92616 2671 aaKnown RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 H0Y8X5 98 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ACTN4O43707 911 aaKnown RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 DFNA5O60443 496 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ZBED1O96006 694 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 CTSKP43235 329 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ENPEPQ07075 957 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 TTC31Q49AM3 519 aaPredicted RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 FOXD4L5Q5VV16 416 aaPredicted RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 ARHGAP17Q68EM7 881 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 PM20D1Q6GTS8 502 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 DHRS13Q6UX07 377 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 LAYNQ6UX15 382 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ADIPOR2Q86V24 386 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 AHI1Q8N157 1196 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ANKRD52Q8NB46 1076 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 SLC4A11Q8NBS3 891 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 FOXD4L4Q8WXT5 416 aaPredicted RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 TMA16Q96EY4 203 aaKnown RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 TMEM8AQ9HCN3 771 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 ABCB8Q9NUT2 735 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 FTSJ1Q9UET6 329 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 GGA2Q9UJY4 613 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 STOML2Q9UJZ1 356 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 HBS1LQ9Y450 684 aaKnown RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 COL5A1P20908 1838 aaPredicted RBP16.44■□□□□ 0.22
LMNA-223ENST00000515459 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
LMNA-223ENST00000515459 PAPSS1O43252 624 aaPredicted RBP16.43■□□□□ 0.22
LMNA-223ENST00000515459 MYL1P05976 194 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 ATP5BP06576 529 aaKnown RBP16.43■□□□□ 0.22
LMNA-223ENST00000515459 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
LMNA-223ENST00000515459 RAD23BP54727 409 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 NFIL3Q16649 462 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 KCNT1Q5JUK3 1230 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 ADGRF1Q5T601 910 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 MBLAC2Q68D91 279 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 KRT39Q6A163 491 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 KIAA0907Q7Z7F0 614 aaPredicted RBP16.43■□□□□ 0.22
LMNA-223ENST00000515459 TMPRSS12Q86WS5 348 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 FAM186BQ8IYM0 893 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.43■□□□□ 0.22
LMNA-223ENST00000515459 RNF139Q8WU17 664 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 GOLGA1Q92805 767 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 CRELD1Q96HD1 420 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 FAXDC2Q96IV6 333 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 ULBP1Q9BZM6 244 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 CISHQ9NSE2 258 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 SUN2Q9UH99 717 aa16.43■□□□□ 0.22
LMNA-223ENST00000515459 LATS1O95835 1130 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 DLDP09622 509 aaKnown RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 PSMC2P35998 433 aaKnown RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 ABCG1P45844 678 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 C21orf59P57076 290 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 RACK1P63244 317 aaKnown RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 IL9RQ01113 521 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 ZNF776Q68DI1 518 aaPredicted RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 NDRG1Q92597 394 aaKnown RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 DCBLD2Q96PD2 775 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 ORAI3Q9BRQ5 295 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 ACE2Q9BYF1 805 aaPredicted RBP16.42■□□□□ 0.22
LMNA-223ENST00000515459 LRRC4Q9HBW1 653 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 SFMBT1Q9UHJ3 866 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 NCKAP1Q9Y2A7 1128 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 SHROOM3Q8TF72 1996 aa16.42■□□□□ 0.22
LMNA-223ENST00000515459 A0A1B0GTQ1 180 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 PLK4O00444 970 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 IGHV4-34P06331 123 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 ZSCAN22P10073 491 aaPredicted RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 POLR2EP19388 210 aaKnown RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 GTF2H1P32780 548 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 HNF1BP35680 557 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 BSPRYQ5W0U4 402 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 KIAA0895LQ68EN5 471 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 USP30Q70CQ3 517 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 BHLHA9Q7RTU4 235 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 ZC3H3Q8IXZ2 948 aaKnown RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 EDEM1Q92611 657 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 IPO9Q96P70 1041 aaKnown RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 UBL7Q96S82 380 aaPredicted RBP16.41■□□□□ 0.22
LMNA-223ENST00000515459 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 SCML1Q9UN30 329 aa16.41■□□□□ 0.22
LMNA-223ENST00000515459 PCDHGA1Q9Y5H4 931 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms