RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SCAMP5Q8TAC9 235 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PCED1BQ96HM7 432 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LSG1Q9H089 658 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 ERVMER34-1Q9H9K5 563 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PREBQ9HCU5 417 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TJP2Q9UDY2 1190 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ERRFI1Q9UJM3 462 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 KCND3Q9UK17 655 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PLA2G4CQ9UP65 541 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NCKAP1Q9Y2A7 1128 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TP53TG5Q9Y2B4 290 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 U3KQA8 63 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CNTRLQ7Z7A1 2325 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 COL27A1Q8IZC6 1860 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3DA0A087WVF3 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3IA0A087WXS9 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3EA0A087X179 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3KA0A087X1G2 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PRAMEF33A0A0G2JMD5 474 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3FA6NER0 549 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 LRRC72A6NJI9 287 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 EFCAB7A8K855 629 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3LB9A6J9 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TLR5O60602 858 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PRAMEF10O60809 474 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NADKO95544 446 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 ITGB3P05106 788 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 KRT19P08727 400 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3HP0C7X1 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ALPPL2P10696 532 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 YWHAQP27348 245 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PCSK1P29120 753 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 POLR2BP30876 1174 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 UGT1A5P35504 534 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PPP3CCP48454 512 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PGFP49763 221 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LIG4P49917 911 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 RCAN1P53805 252 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NOP14P78316 857 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 NUCB1Q02818 461 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 KLRB1Q12918 225 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SPIDRQ14159 915 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LACTB2Q53H82 288 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3GQ6DHY5 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3CQ6IPX1 549 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 VSTM1Q6UX27 236 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 EFL1Q7Z2Z2 1120 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 DSG4Q86SJ6 1040 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MCEMP1Q8IX19 187 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TBC1D3Q8IZP1 549 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 CPT1CQ8TCG5 803 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TCTN2Q96GX1 697 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SPATA17Q96L03 361 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 OMDQ99983 421 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SYT15Q9BQS2 421 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LARP6Q9BRS8 491 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 MSTO1Q9BUK6 570 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TTLL2Q9BWV7 592 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CALN1Q9BXU9 219 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TUFT1Q9NNX1 390 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CRTAC1Q9NQ79 661 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PRSS16Q9NQE7 514 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.42□□□□□ -1.862e-6■■■■■ 84.9
CHD1-211ENST00000514344 FOXJ2Q9P0K8 574 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MAP10Q9P2G4 905 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 RBM19Q9Y4C8 960 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 RTTNQ86VV8 2226 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 UNC13CQ8NB66 2214 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ACANP16112 2415 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ATRQ13535 2644 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PKDREJQ9NTG1 2253 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 K7ESM1 405 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CLDN5O00501 218 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 CPLX1O14810 134 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NPC1O15118 1278 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MDM4O15151 490 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 OGTO15294 1046 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MID1O15344 667 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 FAM189A1O60320 539 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 GREM1O60565 184 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 DEXIO95424 95 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 HOXB4P17483 251 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 PLCG1P19174 1290 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 RPA1P27694 616 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MAGEA11P43364 429 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MAPK10P53779 464 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TFAMQ00059 246 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 SFSWAPQ12872 951 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 STAT4Q14765 748 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PERM1Q5SV97 790 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 RNF20Q5VTR2 975 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NUGGCQ68CJ6 796 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ZPBP2Q6X784 338 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 HTR3DQ70Z44 454 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MMAAQ8IVH4 418 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 TP53INP2Q8IXH6 220 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SMC5Q8IY18 1101 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 IL22RA1Q8N6P7 574 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MFSD2AQ8NA29 543 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms