RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.2□□□□□ -1.74
ATP2C1-220ENST00000513636 MYH3P11055 1940 aa4.2□□□□□ -1.74
ATP2C1-220ENST00000513636 NUP98P52948 1817 aa4.2□□□□□ -1.74
ATP2C1-220ENST00000513636 IL16Q14005 1332 aa4.2□□□□□ -1.74
ATP2C1-220ENST00000513636 TTC3P53804 2025 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 M0R3H8 397 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 EXOC5O00471 708 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 RNMTO43148 476 aaKnown RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 HTATSF1O43719 755 aaKnown RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 SLC28A2O43868 658 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 TMPRSS11DO60235 418 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 KCNA3P22001 575 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 SLC11A2P49281 568 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 CALD1Q05682 793 aaKnown RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 TEFQ10587 303 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 DCTN1Q14203 1278 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 ODF1Q14990 250 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 FAM110CQ1W6H9 321 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 PRTGQ2VWP7 1150 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 MCM10Q7L590 875 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 DNAJC5GQ8N7S2 189 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 BPIFB1Q8TDL5 484 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 PPP1R10Q96QC0 940 aaKnown RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 MEIS3Q99687 375 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 MESP1Q9BRJ9 268 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 GBA2Q9HCG7 927 aaPredicted RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 RGS17Q9UGC6 210 aaPredicted RBP4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 FANCIQ9NVI1 1328 aa4.19□□□□□ -1.74
ATP2C1-220ENST00000513636 ZC3H11AO75152 810 aaKnown RBP eCLIP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 USP12O75317 370 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 SNUPNO95149 360 aaKnown RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 APEHP13798 732 aaKnown RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 DIO1P49895 249 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 YPEL5P62699 121 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 NKX6-1P78426 367 aaPredicted RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 MTMR1Q13613 665 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 FHL3Q13643 280 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 PLA1AQ53H76 456 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 LMBRD2Q68DH5 695 aaPredicted RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 CAPRIN2Q6IMN6 1127 aaKnown RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 UBE2Q1Q7Z7E8 422 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 FOXP4Q8IVH2 680 aaPredicted RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 WDR63Q8IWG1 891 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 PELI3Q8N2H9 469 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 IL17REQ8NFR9 667 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 NTPCRQ9BSD7 190 aaKnown RBP4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 SLC13A1Q9BZW2 595 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 MYH16Q9H6N6 1097 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 DECR2Q9NUI1 292 aa4.18□□□□□ -1.74
ATP2C1-220ENST00000513636 LAMB2P55268 1798 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 CLIC1O00299 241 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 FOXN3O00409 490 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 RGS10O43665 173 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 NGFRP08138 427 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 ZNF853P0CG23 659 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 EPHA3P29320 983 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 SEC23BQ15437 767 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 ZIK1Q3SY52 487 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 DCAF12L1Q5VU92 463 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 KRT27Q7Z3Y8 459 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 MPP5Q8N3R9 675 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 PRR18Q8N4B5 295 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 TSR2Q969E8 191 aaKnown RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 MS4A7Q9GZW8 240 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 ARMT1Q9H993 441 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 SEMA4BQ9NPR2 832 aaPredicted RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 PIH1D1Q9NWS0 290 aaKnown RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 TMOD3Q9NYL9 352 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 TSPYL4Q9UJ04 414 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 LAS1LQ9Y4W2 734 aaKnown RBP4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 COL24A1Q17RW2 1714 aa4.17□□□□□ -1.74
ATP2C1-220ENST00000513636 PALLDQ8WX93 1383 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 CACNA1SQ13698 1873 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 INPPL1O15357 1258 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 IL33O95760 270 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 CENPBP07199 599 aaPredicted RBP4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 POU2F2P09086 479 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 RECQLP46063 649 aaPredicted RBP4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 ALDH7A1P49419 539 aaKnown RBP4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 MFSD13AQ14CX5 517 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 TAF7Q15545 349 aaPredicted RBP4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 DGKKQ5KSL6 1271 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 GAS2L3Q86XJ1 694 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 TTC5Q8N0Z6 440 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 B4GALNT2Q8NHY0 566 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 ZNF479Q96JC4 524 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 LMLNQ96KR4 655 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 SCNM1Q9BWG6 230 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 ARL8BQ9NVJ2 186 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 TMEM45AQ9NWC5 275 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 BABAM1Q9NWV8 329 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 SELENONQ9NZV5 590 aa4.16□□□□□ -1.74
ATP2C1-220ENST00000513636 HEG1Q9ULI3 1381 aa4.15□□□□□ -1.74
ATP2C1-220ENST00000513636 CHL1O00533 1208 aa4.15□□□□□ -1.75
ATP2C1-220ENST00000513636 ACOT8O14734 319 aa4.15□□□□□ -1.75
ATP2C1-220ENST00000513636 KATNA1O75449 491 aa4.15□□□□□ -1.75
ATP2C1-220ENST00000513636 KRT10P13645 584 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms