RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 C12orf56Q8IXR9 622 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDX41-216ENST00000513562 HIC2Q96JB3 615 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 TNMDQ9H2S6 317 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 EBF2Q9HAK2 575 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 GDF3Q9NR23 364 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 CKAP5Q14008 2032 aa11.45□□□□□ -0.58
DDX41-216ENST00000513562 LRRIQ3A6PVS8 624 aaPredicted RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 PYCARD-AS1I3L0S3 204 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 STX6O43752 255 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 C4BPAP04003 597 aaKnown RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 CKMT2P17540 419 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 CD38P28907 300 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 ASPAP45381 313 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 GALCP54803 685 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 PCBP4P57723 403 aaKnown RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 NXPH1P58417 271 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 INCA1Q0VD86 236 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 MPPE1Q53F39 396 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 FAM26FQ5R3K3 315 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 NCEH1Q6PIU2 408 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 CHST9Q7L1S5 443 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 KANSL1Q7Z3B3 1105 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 KIAA0907Q7Z7F0 614 aaPredicted RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 ZC3H3Q8IXZ2 948 aaKnown RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 AHI1Q8N157 1196 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 PARD3BQ8TEW8 1205 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 TTC9Q92623 222 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 CYFIP2Q96F07 1278 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 ZNF578Q96N58 590 aaPredicted RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 TWNKQ96RR1 684 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 PANK2Q9BZ23 570 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 RSPH9Q9H1X1 276 aaPredicted RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 PABPC3Q9H361 631 aaKnown RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 ERVMER34-1Q9H9K5 563 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 CPNE5Q9HCH3 593 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 MARCH2Q9P0N8 246 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 SERGEFQ9UGK8 458 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 ADAMTS1Q9UHI8 967 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 SCML1Q9UN30 329 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
DDX41-216ENST00000513562 GOLGA4Q13439 2230 aaKnown RBP11.44□□□□□ -0.58
DDX41-216ENST00000513562 FAM47DPA6NHR8 397 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 WNT9AO14904 365 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 EXOC3O60645 756 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 WISP1O95388 367 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 DLDP09622 509 aaKnown RBP11.43□□□□□ -0.58
DDX41-216ENST00000513562 TRIM21P19474 475 aaKnown RBP11.43□□□□□ -0.58
DDX41-216ENST00000513562 ACP1P24666 158 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 RXRGP48443 463 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 LY6DQ14210 128 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 KCNJ12Q14500 433 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 SGSM1Q2NKQ1 1148 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 ARHGAP40Q5TG30 622 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 BROXQ5VW32 411 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 NELFCDQ8IXH7 590 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 OXR1Q8N573 874 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 SNRNP27Q8WVK2 155 aaKnown RBP11.43□□□□□ -0.58
DDX41-216ENST00000513562 TAF4BQ92750 862 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 PLD4Q96BZ4 506 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 ARID3AQ99856 593 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 AASDHPPTQ9NRN7 309 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 ABCB8Q9NUT2 735 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 KBTBD4Q9NVX7 518 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 FBXL12Q9NXK8 326 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
DDX41-216ENST00000513562 GGA2Q9UJY4 613 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 STRIP2Q9ULQ0 834 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
DDX41-216ENST00000513562 MORC2Q9Y6X9 1032 aaPredicted RBP11.43□□□□□ -0.58
DDX41-216ENST00000513562 SHROOM3Q8TF72 1996 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 SLC12A8A0AV02 714 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 LRRC72A6NJI9 287 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 TLR4O00206 839 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 ASS1P00966 412 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 RPN1P04843 607 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 ATP5BP06576 529 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 PABPC1P11940 636 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 CCR5P51681 352 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 ZNF445P59923 1031 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 ASIC1P78348 528 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 EHHADHQ08426 723 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 BNIP3Q12983 259 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 RABEP1Q15276 862 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 TRIP4Q15650 581 aaPredicted RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 PROX2Q3B8N5 592 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 ZACNQ401N2 412 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 MBLAC2Q68D91 279 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 CNNM4Q6P4Q7 775 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 DHX40Q8IX18 779 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 ARHGAP18Q8N392 663 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 PDILTQ8N807 584 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 OR2T34Q8NGX1 318 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 GANCQ8TET4 914 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 MYO19Q96H55 970 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 NAF1Q96HR8 494 aaKnown RBP11.42□□□□□ -0.58
DDX41-216ENST00000513562 NT5C1AQ9BXI3 368 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 DUSP16Q9BY84 665 aa11.42□□□□□ -0.58
DDX41-216ENST00000513562 LRRC27Q9C0I9 530 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms