RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 SERPINA4P29622 427 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CDC25AP30304 524 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ERVPABLB-1P60509 514 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 YPEL5P62699 121 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RPS21P63220 83 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NTHL1P78549 312 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ELAVL3Q14576 367 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TRIP4Q15650 581 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MEA1Q16626 185 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 EDRF1Q3B7T1 1238 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC14Q49A88 953 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HYIQ5T013 277 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZDHHC20Q5W0Z9 365 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PTAR1Q7Z6K3 402 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 C14orf80Q86SX3 495 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PDZD3Q86UT5 571 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PAQR7Q86WK9 346 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MIB1Q86YT6 1006 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 C12orf56Q8IXR9 622 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 FBXO39Q8N4B4 442 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZCCHC9Q8N567 271 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NECAB1Q8N987 351 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TMEM161BQ8NDZ6 487 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SPATA20Q8TB22 786 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HEXDCQ8WVB3 486 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 KCNB2Q92953 911 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 BTN2A3PQ96KV6 586 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 DUSP9Q99956 384 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC77Q9BR77 488 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TPSD1Q9BZJ3 242 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CDH19Q9H159 772 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ERVMER34-1Q9H9K5 563 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SP110Q9HB58 689 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RXFP3Q9NSD7 469 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 DNAAF2Q9NVR5 837 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ANAPC2Q9UJX6 822 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GTF3C4Q9UKN8 822 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SCML2Q9UQR0 700 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TIMM13Q9Y5L4 95 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CUL9Q8IWT3 2517 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CPED1A4D0V7 1026 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 H3BRJ5 948 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 K7ELQ4 463 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 QSOX1O00391 747 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NDC80O14777 642 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CBFA2T2O43439 604 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC28A2O43868 658 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 KCNJ13O60928 360 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HSF2BPO75031 334 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MTA2O94776 668 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ADCY5O95622 1261 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RPN2P04844 631 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TYRP14679 529 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GOT1P17174 413 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 AMD1P17707 334 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MX2P20592 715 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NDUFS1P28331 727 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SDC4P31431 198 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SCNN1AP37088 669 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 YWHAGP61981 247 aaKnown RBP eCLIP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RPS15P62841 145 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CFHR1Q03591 330 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SCRN1Q12765 414 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC10A6Q3KNW5 377 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ADGRF1Q5T601 910 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NT5DC1Q5TFE4 455 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MBLAC2Q68D91 279 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CWF19L1Q69YN2 538 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RNF19BQ6ZMZ0 732 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HTR3DQ70Z44 454 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CDR2LQ86X02 465 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ERICH1Q86X53 443 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PARP9Q8IXQ6 854 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 RBM12BQ8IXT5 1001 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NRSN1Q8IZ57 195 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CNPY4Q8N129 248 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PPM1KQ8N3J5 372 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GUF1Q8N442 669 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PCDH20Q8N6Y1 951 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CEP120Q8N960 986 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TTC8Q8TAM2 541 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TOE1Q96GM8 510 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PLIN2Q99541 437 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HNRNPABQ99729 332 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 REEP2Q9BRK0 252 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SLC4A5Q9BY07 1137 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF518BQ9C0D4 1074 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 B3GNT4Q9C0J1 378 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 DEF6Q9H4E7 631 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 SYTL2Q9HCH5 934 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 MRPL47Q9HD33 250 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 INTS7Q9NVH2 962 aaKnown RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 KLHL11Q9NVR0 708 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GULP1Q9UBP9 304 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PCDHGB7Q9Y5F8 929 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms