RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 GJD2Q9UKL4 321 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 RAB21Q9UL25 225 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 TRPC5Q9UL62 973 aaPredicted RBP3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 UBE2J1Q9Y385 318 aaPredicted RBP3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 PCDHA10Q9Y5I2 948 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 EPN1Q9Y6I3 576 aaPredicted RBP3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 MYOM1P52179 1685 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 IQGAP3Q86VI3 1631 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 SYNJ2O15056 1496 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 CCDC141Q6ZP82 1450 aa3.54□□□□□ -1.84
CALCOCO2-216ENST00000509784 CCDC144AA2RUR9 1427 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 NUP160Q12769 1436 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 C9orf84Q5VXU9 1444 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ANKRD50Q9ULJ7 1429 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 EIF3AQ14152 1382 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ANKRD30AQ9BXX3 1397 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 COL4A3Q01955 1670 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 SHROOM2Q13796 1616 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 PREX2Q70Z35 1606 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 MADDQ8WXG6 1647 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3DA0A087WVF3 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3IA0A087WXS9 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3EA0A087X179 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3KA0A087X1G2 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 CCDC187A0A096LP49 1063 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 LOC105369274A0A096LPK9 316 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 LOC102723532A0A0G2JNH3 316 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 A0A1B0GVC2 190 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 GXYLT2A0PJZ3 443 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3BA6NDS4 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3FA6NER0 549 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 AGAP5A6NIR3 686 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3LB9A6J9 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 C1QTNF3-AMACRE9PGA6 284 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 NPIPB8E9PQR5 432 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 H0YIZ8 118 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 SUV39H1O43463 412 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 EPB41L2O43491 1005 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ESRRBO95718 433 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 CYP21A2P08686 494 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 NPSP0C0P6 89 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM163BP0C2L3 166 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ELFN1P0C7U0 828 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3HP0C7X1 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FPR3P25089 353 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ITPKBP27987 946 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ADRA1BP35368 520 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 IGHMBP2P38935 993 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 PLA2G5P39877 138 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 MPLP40238 635 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 COPB1P53618 953 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 EEFSECP57772 596 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 RBM6P78332 1123 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TXNL4AP83876 142 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 CCDC15Q0P6D6 951 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 LMAN2Q12907 356 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FOXI1Q12951 378 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBX2Q13207 712 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 DNASE1L3Q13609 305 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 CBFBQ13951 182 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 DLGAP5Q15398 846 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 SMAD1Q15797 465 aaKnown RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 LRRC24Q50LG9 513 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 PCID2Q5JVF3 399 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3GQ6DHY5 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 LAIR1Q6GTX8 287 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 DGAT2L7PQ6IED9 249 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3CQ6IPX1 549 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ACSM6Q6P461 480 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TMED8Q6PL24 325 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 KIRREL2Q6UWL6 708 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 C16orf89Q6UX73 402 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 WDR53Q7Z5U6 358 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ANKS1BQ7Z6G8 1248 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 HEATR4Q86WZ0 1026 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TMTC1Q8IUR5 882 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 TBC1D3Q8IZP1 549 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 OR4N4Q8N0Y3 316 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ESX1Q8N693 406 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 PNPLA1Q8N8W4 532 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 BEND2Q8NDZ0 799 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 HERVK_113Q902F9 699 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FRAT1Q92837 279 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 COQ10AQ96MF6 247 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FSD1LQ9BXM9 530 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ABHD16BQ9H3Z7 469 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 RMI1Q9H9A7 625 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 BAG5Q9UL15 447 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 ADAMTS5Q9UNA0 930 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 SLC12A4Q9UP95 1085 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 DERAQ9Y315 318 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM135AQ9P2D6 1515 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 A2MP01023 1474 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 MAGI2Q86UL8 1455 aa3.53□□□□□ -1.84
CALCOCO2-216ENST00000509784 PDS5BQ9NTI5 1447 aa3.53□□□□□ -1.85
CALCOCO2-216ENST00000509784 CCDC151A5D8V7 595 aa3.52□□□□□ -1.85
CALCOCO2-216ENST00000509784 FAM90A20PA6NIJ5 464 aa3.52□□□□□ -1.85
CALCOCO2-216ENST00000509784 STX16-NPEPL1H3BU86 382 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms