RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CD248Q9HCU0 757 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 EHD2Q9NZN4 543 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 MARCH2Q9P0N8 246 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 IFNKQ9P0W0 207 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 CDV3Q9UKY7 258 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 NEU3Q9UQ49 428 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 SNX10Q9Y5X0 201 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 K7EQS6 105 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 WFS1O76024 890 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ADH1CP00326 375 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 PENKP01210 267 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 PLEKP08567 350 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ADH5P11766 374 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 HOXD9P28356 352 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 PDE6CP51160 858 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 GALK1P51570 392 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 KPNA1P52294 538 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 CDR2Q01850 454 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 OGDHQ02218 1023 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 NHLH1Q02575 133 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 CENPCQ03188 943 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 NNTQ13423 1086 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 CLEC16AQ2KHT3 1053 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 FKBP15Q5T1M5 1219 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 PIK3R6Q5UE93 754 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 TMEM215Q68D42 235 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 MMS22LQ6ZRQ5 1243 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 MON1BQ7L1V2 547 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC26A9Q7LBE3 791 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF571Q7Z3V5 609 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 RALGPS2Q86X27 583 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 SUGP1Q8IWZ8 645 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF683Q8IZ20 524 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ADGRG2Q8IZP9 1017 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 DEFB106AQ8N104 65 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 CPA6Q8N4T0 437 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 EMC1Q8N766 993 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC30A5Q8TAD4 765 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 CPA5Q8WXQ8 436 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 NELL1Q92832 810 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ATP2A3Q93084 1043 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 BHMTQ93088 406 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 PPP1R13BQ96KQ4 1090 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 LMLNQ96KR4 655 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 C11orf70Q9BRQ4 267 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 OSBPL6Q9BZF3 934 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 MFSD1Q9H3U5 465 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 TSPY26PQ9H489 355 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 C8orf33Q9H7E9 229 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 SPHK2Q9NRA0 654 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 ST7Q9NRC1 585 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 STOML2Q9UJZ1 356 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 TMEM59LQ9UK28 342 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 SIT1Q9Y3P8 196 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 OTOGLQ3ZCN5 2332 aa7.51□□□□□ -1.21
TOPBP1-207ENST00000509162 GVINP1Q7Z2Y8 2422 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ATG2BQ96BY7 2078 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PRRT4C9JH25 899 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 H0Y858 1186 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 DDX3XO00571 662 aaKnown RBP eCLIP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 MED7O43513 233 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CACNG3O60359 315 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ADAM23O75077 832 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 TULP3O75386 442 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 FBXO21O94952 628 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 NFATC1O95644 943 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 LSM8O95777 96 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CISD3P0C7P0 127 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 MMP8P22894 467 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ATP5C1P36542 298 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PRKCIP41743 596 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 STAT1P42224 750 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 KIR2DL1P43626 348 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 RPS9P46781 194 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 GSCP56915 257 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ARID5AQ03989 594 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF211Q13398 564 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 GEN1Q17RS7 908 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 FIGNQ5HY92 759 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 EMC10Q5UCC4 262 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 BTBD8Q5XKL5 378 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 RFWD3Q6PCD5 774 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF852Q6ZMS4 543 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 BEND5Q7L4P6 421 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CIR1Q86X95 450 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 DENND1CQ8IV53 801 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 KIAA1958Q8N8K9 716 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 NAT16Q8N8M0 369 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF397Q8NF99 534 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 NEK11Q8NG66 645 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 OR52K2Q8NGK3 314 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms