RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 APPL2Q8NEU8 664 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 PLEKHO2Q8TD55 490 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 PTPRN2Q92932 1015 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 JAKMIP2Q96AA8 810 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 IGSF21Q96ID5 467 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 BRINP2Q9C0B6 783 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 MTMR12Q9C0I1 747 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 SAMSN1Q9NSI8 373 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 INTS7Q9NVH2 962 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 RAB20Q9NX57 234 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 GDAP2Q9NXN4 497 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 LIMA1Q9UHB6 759 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 ADAM28Q9UKQ2 775 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 DSEQ9UL01 958 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 NUB1Q9Y5A7 615 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 NPFFR2Q9Y5X5 522 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 KIAA1671Q9BY89 1806 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRBV23OR9-2A0A075B6M9 112 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZC3H12DA2A288 527 aaKnown RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 LCHNA4D1U4 455 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 CASTOR2A6NHX0 329 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 GRXCR1A8MXD5 290 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 KPNA7A9QM74 516 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 H7C4K7 107 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 M0QZQ0 153 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 HUS1O60921 280 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 FGF18O76093 207 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 SOD2P04179 222 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 ITGB3P05106 788 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 KRT19P08727 400 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 DBHP09172 617 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRIM49P0CI25 452 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRIM49CP0CI26 452 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRIM21P19474 475 aaKnown RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 POU3F3P20264 500 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TBXAS1P24557 533 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 GCLMP48507 274 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 EPHB3P54753 998 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 YWHAEP62258 255 aaKnown RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 DLG4P78352 724 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 SRSF3P84103 164 aaKnown RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 RBM10P98175 930 aaKnown RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 MYL7Q01449 175 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 PPP3CAQ08209 521 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 KCNAB2Q13303 367 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 CBX2Q14781 532 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 KRT31Q15323 416 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 USP41Q3LFD5 358 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF667Q5HYK9 610 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 C1orf220Q5T0J3 134 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 FKBP15Q5T1M5 1219 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 FUT10Q6P4F1 479 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 RSPO2Q6UXX9 243 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 DSTYKQ6XUX3 929 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 GBP6Q6ZN66 633 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 METTL23Q86XA0 190 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 CREBRFQ8IUR6 639 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 FMNL3Q8IVF7 1028 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 PPIL6Q8IXY8 311 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 RNF168Q8IYW5 571 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 RCBTB1Q8NDN9 531 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 OR5B17Q8NGF7 314 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 CXorf38Q8TB03 319 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 C18orf25Q96B23 403 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 IQCDQ96DY2 449 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 EEF2KMTQ96G04 330 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 HPDLQ96IR7 371 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 HERC2P3Q9BVR0 1158 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 HSD3B7Q9H2F3 369 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 NDST4Q9H3R1 872 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 CYP3A43Q9HB55 503 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 DNAJB4Q9UDY4 337 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TUBGCP4Q9UGJ1 667 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 MBD1Q9UIS9 605 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 SIX4Q9UIU6 781 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 AGAP1Q9UPQ3 857 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 SIT1Q9Y3P8 196 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 IRAK3Q9Y616 596 aa5.85□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRANK1O15050 2925 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 PTPRJQ12913 1337 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 A0A1W2PQC6 194 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LGALS16A8MUM7 142 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 NCK2O43639 380 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LPXNO60711 386 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 DNAJC6O75061 913 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 TACC1O75410 805 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 OAZ2O95190 189 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ASS1P00966 412 aaKnown RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 SERPINC1P01008 464 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 HLA-DRAP01903 254 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 FUCA1P04066 466 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ITGB1P05556 798 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 URODP06132 367 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 GLI4P10075 376 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 CTSAP10619 480 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms