RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 HESX1Q9UBX0 185 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 SUSD2Q9UGT4 822 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 PCDHGB2Q9Y5G2 931 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 FLRT2O43155 660 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 ZNF217O75362 1048 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 ADH1CP00326 375 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SETSIPP0DME0 302 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 VDRP11473 427 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 PSEN1P49768 467 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SLC5A3P53794 718 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 BCAT1P54687 386 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 RAD23BP54727 409 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 MFAP3P55082 362 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 MYL5Q02045 173 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 CFHR1Q03591 330 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 HLA-BQ31612 363 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 C10orf76Q5T2E6 689 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SNX30Q5VWJ9 437 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 DHRS13Q6UX07 377 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 PAQR9Q6ZVX9 377 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 TADA2BQ86TJ2 420 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 RGL4Q8IZJ4 473 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 UBR7Q8N806 425 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 NAT16Q8N8M0 369 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 ANKRD52Q8NB46 1076 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SLC4A11Q8NBS3 891 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 LMO3Q8TAP4 145 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 TATDN2Q93075 761 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 HEXIM2Q96MH2 286 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 TWNKQ96RR1 684 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 CDK5RAP1Q96SZ6 601 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 BPIFA3Q9BQP9 254 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 TUBGCP2Q9BSJ2 902 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 DUSP16Q9BY84 665 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 INTS2Q9H0H0 1204 aaKnown RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 WSB2Q9NYS7 404 aaPredicted RBP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 GMIPQ9P107 970 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 HMGXB4Q9UGU5 601 aa9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBE2D3-223ENST00000508249 ARID1BQ8NFD5 2236 aaPredicted RBP9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 GOLGA8CPA6NN73 597 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 SMTNL1A8MU46 457 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 WASH3PC4AMC7 463 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 E9PAM4 449 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CLDN5O00501 218 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CER1O95813 267 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 HLA-EP13747 358 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CCDC130P13994 396 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CD6P30203 668 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 MATKP42679 507 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TLE3Q04726 772 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TYRO3Q06418 890 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 KCNJ12Q14500 433 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 VWA3BQ502W6 1294 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TCP11X2Q5H9J9 407 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TRIM65Q6PJ69 517 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TMEM270Q6UE05 265 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CLEC20AQ6ZU45 233 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TRMT11Q7Z4G4 463 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TMEM25Q86YD3 366 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 IRF2BP1Q8IU81 584 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CREBRFQ8IUR6 639 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 ZNF276Q8N554 614 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 C12orf29Q8N999 325 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 FBXO32Q969P5 355 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TOE1Q96GM8 510 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 MED15Q96RN5 788 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CDC6Q99741 560 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 SMOQ99835 787 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 MKRN2Q9H000 416 aaKnown RBP9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 NDST4Q9H3R1 872 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.871e-7■■■■■ 61.1
UBE2D3-223ENST00000508249 FAM49BQ9NUQ9 324 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 APEX2Q9UBZ4 518 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 CNTN6Q9UQ52 1028 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 PCDHB4Q9Y5E5 795 aa9.64□□□□□ -0.87
UBE2D3-223ENST00000508249 TEX51A0A1B0GUA7 166 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 A0A1B0GVT2 93 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 E2F8A0AVK6 867 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 TBC1D3BA6NDS4 549 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 SLC9A3R1O14745 358 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 XPO1O14980 1071 aaKnown RBP9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 BCAT2O15382 392 aaPredicted RBP9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 COCHO43405 550 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 MED7O43513 233 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 TNFSF14O43557 240 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 CACNG3O60359 315 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 IGLV3-19P01714 112 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 NCAM1P13591 858 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 CD19P15391 556 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 GNSP15586 552 aa9.63□□□□□ -0.87
UBE2D3-223ENST00000508249 ACO1P21399 889 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms