RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SLITRK3O94933 977 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 H6PDO95479 791 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 WDPCPO95876 746 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 IL1BP01584 269 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 F8A1P23610 371 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 RBL1P28749 1068 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 RFC4P35249 363 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 SERPINB5P36952 375 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 NR4A2P43354 598 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 KCNJ12Q14500 433 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 HERC3Q15034 1050 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF618Q5T7W0 954 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 LETMD1Q6P1Q0 360 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 CYP20A1Q6UW02 462 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 GLYCTKQ8IVS8 523 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 BBS7Q8IWZ6 715 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 Q8N9G6 341 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 OR52K2Q8NGK3 314 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 TANKQ92844 425 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 NCLNQ969V3 563 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 RAD51AP1Q96B01 352 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 C18orf8Q96DM3 657 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 EXOC2Q96KP1 924 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 B3GALT6Q96L58 329 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF560Q96MR9 790 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 DEPDC7Q96QD5 511 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 EFHD1Q9BUP0 239 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 LMAN2LQ9H0V9 348 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ATP13A1Q9HD20 1204 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 HMG20AQ9NP66 347 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 NGRNQ9NPE2 291 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 KBTBD4Q9NVX7 518 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ENPP5Q9UJA9 477 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 GINS2Q9Y248 185 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 GMPPBQ9Y5P6 360 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 HEMK1Q9Y5R4 338 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 AUP1Q9Y679 476 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 DEPDC5O75140 1603 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ADAMTS12P58397 1594 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC9B1P1A6NJY1 282 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRC53A6NM62 1247 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 ZNF487B1APH4 448 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 RIPK2O43353 540 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 PSIP1O75475 530 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 SNAP29O95721 258 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 CRTAMO95727 393 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 APOC1P02654 83 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 FDPSP14324 419 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 PEX2P28328 305 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 HLA-FP30511 346 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 FOXN2P32314 431 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 HPCAL1P37235 193 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 C21orf58P58505 322 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 CYP4F8P98187 520 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 NR1H3Q13133 447 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 NAB1Q13506 487 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 RIN1Q13671 783 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 NCOA4Q13772 614 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 DHX34Q14147 1143 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 MFSD13AQ14CX5 517 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 PLEKHG6Q3KR16 790 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 YIF1BQ5BJH7 314 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 RTP2Q5QGT7 225 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 STYK1Q6J9G0 422 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 MILR1Q7Z6M3 343 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 JAZF1Q86VZ6 243 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 TPH2Q8IWU9 490 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 ULK2Q8IYT8 1036 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 CLIP4Q8N3C7 705 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 SETD7Q8WTS6 366 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 KCTD4Q8WVF5 259 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 PIK3R3Q92569 461 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 NUDT16Q96DE0 195 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 FAM161BQ96MY7 647 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 FRMD8Q9BZ67 464 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 LIN28AQ9H9Z2 209 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 MRPL40Q9NQ50 206 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 ARL8BQ9NVJ2 186 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 ACOT9Q9Y305 439 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 AP4B1Q9Y6B7 739 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 CLUHO75153 1309 aa11.09□□□□□ -0.63
PDLIM5-210ENST00000508216 B4E1Z4 1266 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 H3BMQ9 156 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 H3BNH8 94 aa11.08□□□□□ -0.64
PDLIM5-210ENST00000508216 PRPF4O43172 522 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms