RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CYFIP2Q96F07 1278 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 NAF1Q96HR8 494 aaKnown RBP6.04□□□□□ -1.44
GYPB-208ENST00000507009 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
GYPB-208ENST00000507009 MTG2Q9H4K7 406 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 SLC39A2Q9NP94 309 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 ATP13A2Q9NQ11 1180 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 CYLDQ9NQC7 956 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 AASDHPPTQ9NRN7 309 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
GYPB-208ENST00000507009 COMMD8Q9NX08 183 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 IL37Q9NZH6 218 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 AGO1Q9UL18 857 aaKnown RBP6.04□□□□□ -1.44
GYPB-208ENST00000507009 CLEC4EQ9ULY5 219 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 SCML2Q9UQR0 700 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.04□□□□□ -1.44
GYPB-208ENST00000507009 PCDHGB2Q9Y5G2 931 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 NUMA1Q14980 2115 aa6.04□□□□□ -1.44
GYPB-208ENST00000507009 FAM92AA1XBS5 289 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 HHLA1C9JL84 531 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 LDOC1O95751 146 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 STAU1O95793 577 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 PENKP01210 267 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 ITGAVP06756 1048 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 PLA2G2AP14555 144 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 HNF1BP35680 557 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CHKAP35790 457 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 AFMP43652 599 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 BCAT1P54687 386 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CXADRP78310 365 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 AMPD3Q01432 767 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TARDBPQ13148 414 aaKnown RBP eCLIP6.03□□□□□ -1.44
GYPB-208ENST00000507009 SMAD1Q15797 465 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 FOXD4L6Q3SYB3 417 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 HES3Q5TGS1 186 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 FOXD4L5Q5VV16 416 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 CEP135Q66GS9 1140 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TMEM215Q68D42 235 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 FOXD4L3Q6VB84 417 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 CLEC20AQ6ZU45 233 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CHST9Q7L1S5 443 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 EPM2AIP1Q7L775 607 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 SCD5Q86SK9 330 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TADA2BQ86TJ2 420 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 RETREG3Q86VR2 466 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 OR2T3Q8NH03 318 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 FOXD4L4Q8WXT5 416 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 NDRG1Q92597 394 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 IGSF8Q969P0 613 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 PIWIL1Q96J94 861 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 CNDP2Q96KP4 475 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 SLC6A18Q96N87 628 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TWNKQ96RR1 684 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 USP28Q96RU2 1077 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 ACE2Q9BYF1 805 aaPredicted RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 DCLK3Q9C098 648 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 LRRC27Q9C0I9 530 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 BTBD1Q9H0C5 482 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TNMDQ9H2S6 317 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CSNK1G1Q9HCP0 422 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 ABCB8Q9NUT2 735 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 MARCH2Q9P0N8 246 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 TFIP11Q9UBB9 837 aaKnown RBP6.03□□□□□ -1.44
GYPB-208ENST00000507009 DKK4Q9UBT3 224 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 PLA2G4CQ9UP65 541 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 ZNF510Q9Y2H8 683 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 SLC27A6Q9Y2P4 619 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 NFE2L3Q9Y4A8 694 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 PCDHA5Q9Y5H7 936 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CELSR3Q9NYQ7 3312 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 CKAP5Q14008 2032 aa6.03□□□□□ -1.44
GYPB-208ENST00000507009 SMG1Q96Q15 3661 aaKnown RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 MYLKQ15746 1914 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 CAPN9O14815 690 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 NPC1O15118 1278 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 ATXN7O15265 892 aaPredicted RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 STX6O43752 255 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 RFPL3O75679 317 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 WFS1O76024 890 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 HLA-DRAP01903 254 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 KRT10P13645 584 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 CD27P26842 260 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 ASPAP45381 313 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 GRIA4P48058 902 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 NUMBP49757 651 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 ZNF132P52740 706 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 YWHAGP61981 247 aaKnown RBP eCLIP6.02□□□□□ -1.45
GYPB-208ENST00000507009 RPS14P62263 151 aaKnown RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 COG7P83436 770 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 SLC39A14Q15043 492 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 EIF4HQ15056 248 aaKnown RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 E2F5Q15329 346 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 PTPRNQ16849 979 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 BMT2Q1RMZ1 405 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 SGSM1Q2NKQ1 1148 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 C8orf34Q49A92 452 aa6.02□□□□□ -1.45
GYPB-208ENST00000507009 TTC31Q49AM3 519 aaPredicted RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 TAF1BQ53T94 588 aaPredicted RBP6.02□□□□□ -1.45
GYPB-208ENST00000507009 PPP1R26Q5T8A7 1209 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms