RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 ETFDHQ16134 617 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 PROSER3Q2NL68 480 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 SPECC1Q5M775 1068 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 EMC10Q5UCC4 262 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 TBC1D1Q86TI0 1168 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CAND1Q86VP6 1230 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 HDAC2Q92769 488 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZC3H10Q96K80 434 aaKnown RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 UBXN10Q96LJ8 280 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 BHMT2Q9H2M3 363 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CXorf36Q9H7Y0 433 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CERS4Q9HA82 394 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 SMC4Q9NTJ3 1288 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 TFCP2L1Q9NZI6 479 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 L1RE1Q9UN81 338 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 TBC1D30Q9Y2I9 924 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 CACNA1FO60840 1977 aa4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 N4BP2Q86UW6 1770 aaPredicted RBP4.83□□□□□ -1.64
CALCOCO2-208ENST00000506971 KIF24Q5T7B8 1368 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 DLG5Q8TDM6 1919 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 RRN3P2A6NIE6 340 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 TMEM233B4DJY2 109 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 PSMD9O00233 223 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 PPP6CO00743 305 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CES2O00748 559 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 MGEA5O60502 916 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 RASAL1O95294 804 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CD4P01730 458 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 DLDP09622 509 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 TNFSF4P23510 183 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CERS1P27544 350 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC7A1P30825 629 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 MMP13P45452 471 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 ITGA8P53708 1063 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 G3BP1Q13283 466 aaKnown RBP eCLIP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CTBP1Q13363 440 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 MVPQ14764 893 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 TAF11Q15544 211 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SUPT20HL1Q3ZLR7 823 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CCDC38Q502W7 563 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC44A4Q53GD3 710 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 RNF220Q5VTB9 566 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CACHD1Q5VU97 1274 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 IZUMO3Q5VZ72 239 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 TRIM72Q6ZMU5 477 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 Q6ZWC4 215 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CHSY1Q86X52 802 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 COL23A1Q86Y22 540 aaPredicted RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SPARTQ8N0X7 666 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SCARB1Q8WTV0 552 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 ARHGAP45Q92619 1136 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SLC26A6Q9BXS9 759 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 B3GNT5Q9BYG0 378 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 BTBD1Q9H0C5 482 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZMAT3Q9HA38 289 aaKnown RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 SMYD2Q9NRG4 433 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CWC25Q9NXE8 425 aaPredicted RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 FLRT1Q9NZU1 646 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF70Q9UC06 446 aaPredicted RBP4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 CRYL1Q9Y2S2 319 aa4.82□□□□□ -1.64
CALCOCO2-208ENST00000506971 PTCH1Q13635 1447 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 PIK3R4Q99570 1358 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 RGPD1P0DJD0 1748 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 A0A088AWK7 358 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 TISP43B9A030 160 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 INO80B-WBP1J3KQ70 363 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 EYA2O00167 538 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZNF213O14771 459 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 GCATO75600 419 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 RASSF9O75901 435 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 DDX58O95786 925 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 PYGLP06737 847 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 THP07101 528 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CYP2C9P11712 490 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ABCB4P21439 1286 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 YY1P25490 414 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 DEKP35659 375 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CASP5P51878 434 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 POLD3Q15054 466 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CERKLQ49MI3 558 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 CCDC92Q53HC0 331 aaPredicted RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 C20orf194Q5TEA3 1177 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ARMC3Q5W041 872 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 FCRL6Q6DN72 434 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 RFX8Q6ZV50 586 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 FASTKD5Q7L8L6 764 aaKnown RBP4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 ZSCAN30Q86W11 494 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 IZUMO1Q8IYV9 350 aa4.81□□□□□ -1.64
CALCOCO2-208ENST00000506971 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms