RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MPZL3Q6UWV2 235 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF517Q6ZMY9 492 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 Q6ZNB5 142 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TPGS1Q6ZTW0 290 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 HTR3DQ70Z44 454 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 Q71RC1 249 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 OSTM1Q86WC4 334 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MICU3Q86XE3 530 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TPH2Q8IWU9 490 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 PHC2Q8IXK0 858 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SLC35F3Q8IY50 421 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SLFN12Q8IYM2 578 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 DCP1BQ8IZD4 617 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SLC22A18ASQ8N1D0 253 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 OR2T34Q8NGX1 318 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 GPBAR1Q8TDU6 330 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MYO19Q96H55 970 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 XPO6Q96QU8 1125 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 NACC1Q96RE7 527 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 BARD1Q99728 777 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CCDC3Q9BQI4 270 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TARS2Q9BW92 718 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 BOCQ9BWV1 1114 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MFRPQ9BY79 579 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 SPRY4Q9C004 299 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 RSPH9Q9H1X1 276 aaPredicted RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MTG2Q9H4K7 406 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 RUBCNLQ9H714 662 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 PLEKHA5Q9HAU0 1116 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 EPB41L5Q9HCM4 733 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 CYP4F12Q9HCS2 524 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 C6orf50Q9HD87 102 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MLXIPLQ9NP71 852 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 GPR27Q9NS67 375 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ELOVL2Q9NXB9 296 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 RRN3Q9NYV6 651 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TRPM5Q9NZQ8 1165 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 KLF15Q9UIH9 416 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 TLK1Q9UKI8 766 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 UBQLN1Q9UMX0 589 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 PCDHB11Q9Y5F2 797 aa3.54□□□□□ -1.84
TCOF1-208ENST00000506063 ANK3Q12955 4377 aaKnown RBP3.54□□□□□ -1.84
TCOF1-208ENST00000506063 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 A0A1W2PP55 124 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 LACTBL1A8MY62 500 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 STMND1H3BQB6 276 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CYB561D2O14569 222 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PRPF3O43395 683 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PRC1O43663 620 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 KRT86O43790 486 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PPP6R2O75170 966 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ZDHHC11BP0C7U3 371 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 JMJD7P0C870 316 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 SPATA31C1P0DKV0 1188 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ACAT1P24752 427 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CSTF2P33240 577 aaKnown RBP eCLIP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 MCM5P33992 734 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CLCN1P35523 988 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 EFNA5P52803 228 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CACNA2D1P54289 1103 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 NLRP5P59047 1200 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 RNASE9P60153 205 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 EHHADHQ08426 723 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 TAF10Q12962 218 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ART3Q13508 389 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 EIF4HQ15056 248 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ENOX2Q16206 610 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 SNX30Q5VWJ9 437 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PAPD7Q5XG87 772 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 FAM171BQ6P995 826 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 APOA5Q6Q788 366 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 SERPINA13PQ6UXR4 307 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 LINGO4Q6UY18 593 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PIK3AP1Q6ZUJ8 805 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 DENND5BQ6ZUT9 1274 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 RALYLQ86SE5 291 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 DSG4Q86SJ6 1040 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 SLITRK4Q8IW52 837 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 NAGSQ8N159 534 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PDCL2Q8N4E4 241 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 AADATQ8N5Z0 425 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 KRI1Q8N9T8 703 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 MCPH1Q8NEM0 835 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 WDR48Q8TAF3 677 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 BHMTQ93088 406 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 FUBP3Q96I24 572 aaKnown RBP eCLIP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 NOX5Q96PH1 765 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 EIF2AK1Q9BQI3 630 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 PYM1Q9BRP8 204 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 DUSP23Q9BVJ7 150 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 KLF16Q9BXK1 252 aaPredicted RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CHMP4BQ9H444 224 aaKnown RBP3.53□□□□□ -1.84
TCOF1-208ENST00000506063 CCSER2Q9H7U1 834 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 POLD4Q9HCU8 107 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 FBXL12Q9NXK8 326 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 LUZP4Q9P127 313 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 WDR35Q9P2L0 1181 aa3.53□□□□□ -1.84
TCOF1-208ENST00000506063 ARHGAP28Q9P2N2 729 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms