RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 AQP12BA6NM10 295 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 J3KTA2 159 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 CA12O43570 354 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 CBFA2T3O75081 653 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 PPFIA2O75334 1257 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 SKAP2O75563 359 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 C1RP00736 705 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 GSTM5P46439 218 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 SPARCL1Q14515 664 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 P3H1Q32P28 736 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 TMEM196Q5HYL7 178 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 TMEM63BQ5T3F8 832 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 BCDIN3DQ7Z5W3 292 aaKnown RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 C12orf76Q8N812 135 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 FAM71DQ8N9W8 422 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 EIF3CQ99613 913 aaKnown RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 CINPQ9BW66 212 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-205ENST00000505998 EPS8L2Q9H6S3 715 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 TMEM8AQ9HCN3 771 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 OBP2BQ9NPH6 170 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 RIPOR2Q9Y4F9 1068 aa6.54□□□□□ -1.36
NIPBL-205ENST00000505998 NKTRP30414 1462 aaKnown RBP6.53□□□□□ -1.36
NIPBL-205ENST00000505998 AOX1Q06278 1338 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 PNMA6EA0A0J9YXQ4 647 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 GCATO75600 419 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 MT-CO3P00414 261 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 NPPBP16860 134 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 ALDH18A1P54886 795 aaKnown RBP6.53□□□□□ -1.36
NIPBL-205ENST00000505998 CCDC15Q0P6D6 951 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 BFSP2Q13515 415 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 KCNJ12Q14500 433 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 ELF2Q15723 593 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 TMEM119Q4V9L6 283 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 MAFAQ8NHW3 353 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-205ENST00000505998 FAM71BQ8TC56 605 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 CCDC17Q96LX7 622 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 HS6ST2Q96MM7 605 aa6.53□□□□□ -1.36
NIPBL-205ENST00000505998 FYTTD1Q96QD9 318 aaKnown RBP6.53□□□□□ -1.36
NIPBL-205ENST00000505998 NPHP4O75161 1426 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-205ENST00000505998 PTCH1Q13635 1447 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 LTBP4Q8N2S1 1624 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 LGALS16A8MUM7 142 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 UBE2Q2LH0YL09 131 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 PCDH17O14917 1159 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 NPC1O15118 1278 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 USP1O94782 785 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 NTSR2O95665 410 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 APEHP13798 732 aaKnown RBP6.52□□□□□ -1.37
NIPBL-205ENST00000505998 NANOS3P60323 173 aaKnown RBP6.52□□□□□ -1.37
NIPBL-205ENST00000505998 CFHR3Q02985 330 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 SEMA3BQ13214 749 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 DNASE1L3Q13609 305 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 PTK2BQ14289 1009 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 CSHL1Q14406 222 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 PFKFB4Q16877 469 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 ZACNQ401N2 412 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 C4orf46Q504U0 113 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 TMEM65Q6PI78 240 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 ZNF788Q6ZQV5 615 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 CLASRPQ8N2M8 674 aaKnown RBP6.52□□□□□ -1.37
NIPBL-205ENST00000505998 ADAMTS18Q8TE60 1221 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 STYXQ8WUJ0 223 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 OVCA2Q8WZ82 227 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 KRTAP4-2Q9BYR5 136 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 ASIC5Q9NY37 505 aa6.52□□□□□ -1.37
NIPBL-205ENST00000505998 BTBD19C9JJ37 291 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 POC1B-GALNT4F8VUJ3 575 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 ASNA1O43681 348 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 ANXA6P08133 673 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 TMIGD3P0DMS9 266 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PDIA3P30101 505 aaKnown RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 GPC5P78333 572 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 NHLH1Q02575 133 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 BLMHQ13867 455 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 TRIM14Q14142 442 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 FAM187BQ17R55 369 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PROSER3Q2NL68 480 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 CERKLQ49MI3 558 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 FAM90A2PQ658T7 463 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 CCDC144NLQ6NUI1 221 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 DCDC5Q6ZRR9 648 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PTF1AQ7RTS3 328 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 GALNT4Q8N4A0 578 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 LINC01465Q8N7H1 131 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PNLDC1Q8NA58 520 aaKnown RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 ATG16L2Q8NAA4 619 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 HASPINQ8TF76 798 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 EDC3Q96F86 508 aaKnown RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PRR11Q96HE9 360 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-205ENST00000505998 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 SAP30LQ9HAJ7 183 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 FSCN3Q9NQT6 498 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 VPS45Q9NRW7 570 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 PTGFRNQ9P2B2 879 aa6.51□□□□□ -1.37
NIPBL-205ENST00000505998 NALCNQ8IZF0 1738 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 CDC42BPGQ6DT37 1551 aa6.5□□□□□ -1.37
NIPBL-205ENST00000505998 IQSEC2Q5JU85 1478 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms