RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CYP2J2P51589 502 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 NDST1P52848 882 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 E2F1Q01094 437 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 VAC14Q08AM6 782 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 EFEMP1Q12805 493 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 SFSWAPQ12872 951 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 BNIP3Q12983 259 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 SLC45A4Q5BKX6 768 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 CHST9Q7L1S5 443 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 SCD5Q86SK9 330 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 UNC93AQ86WB7 457 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 LSMEM2Q8N112 164 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 C12orf29Q8N999 325 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 AGPAT3Q9NRZ7 376 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 LRRC72A6NJI9 287 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 EIF3DO15371 548 aaKnown RBP eCLIP16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 KLK10O43240 276 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 MT-CO3P00414 261 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 ACP1P24666 158 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 HLA-FP30511 346 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 HOXD13P35453 343 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 RXRGP48443 463 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 CSRP3P50461 194 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 GALCP54803 685 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 MPPE1Q53F39 396 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 NCEH1Q6PIU2 408 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 BRAPQ7Z569 592 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 KCNE4Q8WWG9 221 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 HIC2Q96JB3 615 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 EBF2Q9HAK2 575 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 FBXL12Q9NXK8 326 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 STRIP2Q9ULQ0 834 aa16.54■□□□□ 0.24
PDLIM7-210ENST00000503827 A0A1W2PR77 199 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 CLIC2O15247 247 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 STX6O43752 255 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 ATP5BP06576 529 aaKnown RBP16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 KIF11P52732 1056 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 AP3M2P53677 418 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 SRSF1Q07955 248 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 NCOA4Q13772 614 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 SFMBT2Q5VUG0 894 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 PRICKLE2Q7Z3G6 844 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 FAM217AQ8IXS0 508 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 AHI1Q8N157 1196 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF507Q8TCN5 953 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 HPS3Q969F9 1004 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 CYFIP2Q96F07 1278 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 DPH1Q9BZG8 443 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 RSPH9Q9H1X1 276 aaPredicted RBP16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 ERVMER34-1Q9H9K5 563 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 HMGXB4Q9UGU5 601 aa16.53■□□□□ 0.24
PDLIM7-210ENST00000503827 SLC12A8A0AV02 714 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 TLR4O00206 839 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 TGFB1I1O43294 461 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 RNASEH1O60930 286 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 MPOP05164 745 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 HOXD9P28356 352 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 NXPH1P58417 271 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 ERVPABLB-1P60509 514 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 SNRPFP62306 86 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 RSRC2Q7L4I2 434 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 ADIPOR2Q86V24 386 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 OR2T34Q8NGX1 318 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 SNRNP27Q8WVK2 155 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 ELMO3Q96BJ8 720 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 PANK2Q9BZ23 570 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 ABCB8Q9NUT2 735 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 MARCH2Q9P0N8 246 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 GGA2Q9UJY4 613 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 FBXO2Q9UK22 296 aaPredicted RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 PCDHB1Q9Y5F3 818 aa16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 SRPRBQ9Y5M8 271 aaKnown RBP16.52■□□□□ 0.24
PDLIM7-210ENST00000503827 WNT9AO14904 365 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 DXOO77932 396 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 KIF20AO95235 890 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 CASP4P49662 377 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 CCR5P51681 352 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 ZNF445P59923 1031 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 GABREP78334 506 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 SGSM1Q2NKQ1 1148 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 PROX2Q3B8N5 592 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 MBLAC2Q68D91 279 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 KANSL1Q7Z3B3 1105 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 PLD4Q96BZ4 506 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 SERAC1Q96JX3 654 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 CLIC6Q96NY7 704 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 OMDQ99983 421 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 NEUROG2Q9H2A3 272 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 IL17BQ9UHF5 180 aa16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 TPX2Q9ULW0 747 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 HEMK1Q9Y5R4 338 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-210ENST00000503827 USP3Q9Y6I4 520 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms