RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZNF66Q6ZN08 573 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 NRSN1Q8IZ57 195 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 PNISRQ8TF01 805 aaKnown RBP6.62□□□□□ -1.35
NIPBL-203ENST00000503274 WDR60Q8WVS4 1066 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 C5orf34Q96MH7 638 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 PAAF1Q9BRP4 392 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 TP63Q9H3D4 680 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-203ENST00000503274 ABHD10Q9NUJ1 306 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 CDC42BPAQ5VT25 1732 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 CEP162Q5TB80 1403 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 DNPH1O43598 174 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 TNFRSF6BO95407 300 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 TUBB4AP04350 444 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 CERS1P27544 350 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 FOXF2Q12947 444 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 SLC14A1Q13336 389 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 KRT72Q14CN4 511 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 ELF2Q15723 593 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 CC2D1BQ5T0F9 858 aaKnown RBP6.61□□□□□ -1.35
NIPBL-203ENST00000503274 KIAA1614Q5VZ46 1190 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 RINT1Q6NUQ1 792 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 C16orf71Q8IYS4 520 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-203ENST00000503274 ATG16L2Q8NAA4 619 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 OR52L2PQ8NGH6 319 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 SLC22A17Q8WUG5 538 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 DDB2Q92466 427 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 SEMA4CQ9C0C4 833 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 FBXO28Q9NVF7 368 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 MAFFQ9ULX9 164 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 SCAF8Q9UPN6 1271 aaKnown RBP6.61□□□□□ -1.35
NIPBL-203ENST00000503274 FRMD4BQ9Y2L6 1034 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 UBE2J1Q9Y385 318 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-203ENST00000503274 ITSN2Q9NZM3 1697 aa6.61□□□□□ -1.35
NIPBL-203ENST00000503274 SIGLEC1Q9BZZ2 1709 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 GXYLT2A0PJZ3 443 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 M0QZQ0 153 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 SYT5O00445 386 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 CSTBP04080 98 aaKnown RBP6.6□□□□□ -1.35
NIPBL-203ENST00000503274 TSPY4P0CV99 314 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 TSPY10P0CW01 314 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 KLRK1P26718 216 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 SRSF4Q08170 494 aaKnown RBP6.6□□□□□ -1.35
NIPBL-203ENST00000503274 BLMHQ13867 455 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 CBFBQ13951 182 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 TRIM14Q14142 442 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 CNGA3Q16281 694 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-203ENST00000503274 CCDC38Q502W7 563 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 ZNF813Q6ZN06 617 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 ZNF398Q8TD17 642 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 GLMPQ8WWB7 406 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 EID2BQ96D98 161 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 RMDN3Q96TC7 470 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 EFHD1Q9BUP0 239 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 RNF26Q9BY78 433 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-203ENST00000503274 CDCP1Q9H5V8 836 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 ADARB2Q9NS39 739 aaKnown RBP6.6□□□□□ -1.35
NIPBL-203ENST00000503274 PREX1Q8TCU6 1659 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 ABCA6Q8N139 1617 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 SAMD9LQ8IVG5 1584 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 SYCP2Q9BX26 1530 aa6.6□□□□□ -1.35
NIPBL-203ENST00000503274 KAT6AQ92794 2004 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 CGB1A6NKQ9 187 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 TTC34A8MYJ7 566 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 PPP6CO00743 305 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 FCHO1O14526 889 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 RNF8O76064 485 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 CER1O95813 267 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 MPGP29372 298 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 AKT1P31749 480 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 SERPINF1P36955 418 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 MRPS21P82921 87 aaKnown RBP6.59□□□□□ -1.35
NIPBL-203ENST00000503274 CCDC142Q17RM4 750 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 CEP78Q5JTW2 689 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 TRABD2AQ86V40 505 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 AKAP1Q92667 903 aaKnown RBP eCLIP6.59□□□□□ -1.35
NIPBL-203ENST00000503274 RSC1A1Q92681 617 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 KATNAL1Q9BW62 490 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 DACT1Q9NYF0 836 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 LRFN1Q9P244 771 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 NFU1Q9UMS0 254 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 PCDHB7Q9Y5E2 793 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 HEMK1Q9Y5R4 338 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-203ENST00000503274 EHBP1L1Q8N3D4 1523 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 KIDINS220Q9ULH0 1771 aa6.59□□□□□ -1.35
NIPBL-203ENST00000503274 A2MP01023 1474 aa6.59□□□□□ -1.36
NIPBL-203ENST00000503274 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 RPP40O75818 363 aaKnown RBP6.58□□□□□ -1.36
NIPBL-203ENST00000503274 SLC3A2P08195 630 aaKnown RBP6.58□□□□□ -1.36
NIPBL-203ENST00000503274 CELA2AP08217 269 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 ITGA2BP08514 1039 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 POLE2P56282 527 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 MIS18BP1Q6P0N0 1132 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 C16orf89Q6UX73 402 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 SRRM1Q8IYB3 904 aaKnown RBP6.58□□□□□ -1.36
NIPBL-203ENST00000503274 GALNT16Q8N428 558 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 NPIPB3Q92617 1050 aa6.58□□□□□ -1.36
NIPBL-203ENST00000503274 MCRS1Q96EZ8 462 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms