RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 ABCC13Q9NSE7 274 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 COQ4Q9Y3A0 265 aa11.2□□□□□ -0.62
SNCA-207ENST00000502987 HBS1LQ9Y450 684 aaKnown RBP11.2□□□□□ -0.62
SNCA-207ENST00000502987 USP24Q9UPU5 2620 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 C1QTNF9BB2RNN3 333 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 E7ENQ6 273 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 C1QTNF9P0C862 333 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 SETSIPP0DME0 302 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 NCAM1P13591 858 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 OXTRP30559 389 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 FMO5P49326 533 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 PMS1P54277 932 aaKnown RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 NUCB2P80303 420 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 SEMA3BQ13214 749 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 EIF4HQ15056 248 aaKnown RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 TRIP4Q15650 581 aaPredicted RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 UNQ6494/PRO21346Q6UXR6 183 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 SNX19Q92543 992 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 P2RY11Q96G91 374 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 SCNM1Q9BWG6 230 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 MKRN2Q9H000 416 aaKnown RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 CAPN10Q9HC96 672 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 CD248Q9HCU0 757 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 ITM2CQ9NQX7 267 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 WSB2Q9NYS7 404 aaPredicted RBP11.19□□□□□ -0.62
SNCA-207ENST00000502987 CLEC4EQ9ULY5 219 aa11.19□□□□□ -0.62
SNCA-207ENST00000502987 KCNJ18B7U540 433 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 M0QYV0 167 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 MSI1O43347 362 aaKnown RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 HYAL3O43820 417 aaPredicted RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 HLA-EP13747 358 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 PRKCHP24723 683 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 SLC11A2P49281 568 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 TPMTP51580 245 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 TSR1Q2NL82 804 aaKnown RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 COBLL1Q53SF7 1204 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 ADGRF1Q5T601 910 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 DCAF12L1Q5VU92 463 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 CHST9Q7L1S5 443 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 METTL3Q86U44 580 aaKnown RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 CCDC117Q8IWD4 279 aaPredicted RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 UNC45BQ8IWX7 931 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 ZCCHC9Q8N567 271 aaKnown RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 CYB5D2Q8WUJ1 264 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 KCTD13Q8WZ19 329 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 SLC35C1Q96A29 364 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 DHTKD1Q96HY7 919 aaPredicted RBP11.18□□□□□ -0.62
SNCA-207ENST00000502987 MIS12Q9H081 205 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 CNGB3Q9NQW8 809 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 ABCB8Q9NUT2 735 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 STIM2Q9P246 746 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
SNCA-207ENST00000502987 A0A1B0GTW7 788 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 O00370 1275 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 SH3BP5O60239 455 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 TBL1XO60907 577 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 ATP5BP06576 529 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 PAEPP09466 180 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 POLR2EP19388 210 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 PPP1R2P41236 205 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 DAOAP59103 153 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 ZNF445P59923 1031 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 STILQ15468 1287 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 CNGA2Q16280 664 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 TMEM215Q68D42 235 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 LCLAT1Q6UWP7 414 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 PIP4P1Q86T03 277 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 ZC3H3Q8IXZ2 948 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 ZNF366Q8N895 744 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 CADM4Q8NFZ8 388 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 GANCQ8TET4 914 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 WFIKKN2Q8TEU8 576 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 SETD7Q8WTS6 366 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 TFAP2BQ92481 460 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 CAMK1GQ96NX5 476 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 ST7Q9NRC1 585 aa11.17□□□□□ -0.62
SNCA-207ENST00000502987 USP36Q9P275 1121 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 EIF2B4Q9UI10 523 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
SNCA-207ENST00000502987 CKAP5Q14008 2032 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
SNCA-207ENST00000502987 UPK3BL1B0FP48 263 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 UPK3BL2E5RIL1 263 aa11.16□□□□□ -0.62
SNCA-207ENST00000502987 H0Y626 953 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms