RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SCD5Q86SK9 330 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 SLC41A1Q8IVJ1 513 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 TMEM176AQ96HP8 235 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 TWNKQ96RR1 684 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 NUP58Q9BVL2 599 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 MMRN2Q9H8L6 949 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 ITM2CQ9NQX7 267 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 OLA1Q9NTK5 396 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 PLK2Q9NYY3 685 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 MARCH2Q9P0N8 246 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 THAP10Q9P2Z0 257 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 NUDT5Q9UKK9 219 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 HCN2Q9UL51 889 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 RAD54BQ9Y620 910 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 MYH10P35580 1976 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 PLXND1Q9Y4D7 1925 aa11.66□□□□□ -0.54
UBE2D3-211ENST00000502404 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 CETN3O15182 167 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 HYAL3O43820 417 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 TRIM49P0CI25 452 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 TRIM49CP0CI26 452 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 EPB41P11171 864 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 CORO1AP31146 461 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 HARS2P49590 506 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 MFAP3P55082 362 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 YWHAEP62258 255 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 PPP3CAQ08209 521 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 EDRF1Q3B7T1 1238 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 FUT11Q495W5 492 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 ZNF394Q53GI3 561 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 TMPRSS6Q8IU80 811 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 DENND1CQ8IV53 801 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 CPXM2Q8N436 756 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 ANKRD52Q8NB46 1076 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 FBXL13Q8NEE6 735 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 DDI1Q8WTU0 396 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 RNF139Q8WU17 664 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 DNASE2BQ8WZ79 361 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 GATA6Q92908 595 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 PLD4Q96BZ4 506 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 SIPA1Q96FS4 1042 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 SCAND2PQ9GZW5 306 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 PCED1AQ9H1Q7 454 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 APOBEC3GQ9HC16 384 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 TMPRSS4Q9NRS4 437 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 CISHQ9NSE2 258 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 ELOVL2Q9NXB9 296 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 PLA2G4CQ9UP65 541 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
UBE2D3-211ENST00000502404 FAM208BQ5VWN6 2430 aa11.65□□□□□ -0.55
UBE2D3-211ENST00000502404 SLC12A8A0AV02 714 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 WASH3PC4AMC7 463 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 ZBED1O96006 694 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 KLKB1P03952 638 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 HMBSP08397 361 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 NCAM1P13591 858 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 CD59P13987 128 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 MXI1P50539 228 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 YWHAGP61981 247 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 DPYDQ12882 1025 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 TRIP6Q15654 476 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 MPPE1Q53F39 396 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 FYB2Q5VWT5 728 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 ARHGAP17Q68EM7 881 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 ERLEC1Q96DZ1 483 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 IPO9Q96P70 1041 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 GPR174Q9BXC1 333 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 GTPBP4Q9BZE4 634 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 CIPCQ9C0C6 399 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 LRRC4Q9HBW1 653 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 FSCN3Q9NQT6 498 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 USP36Q9P275 1121 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 AGO1Q9UL18 857 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 KIAA1257Q9ULG3 409 aa11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 HBS1LQ9Y450 684 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-211ENST00000502404 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 FAM237AA0A1B0GTK4 181 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 FAM221BA6H8Z2 402 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 METTL12A8MUP2 240 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 LILRA1O75019 489 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 CER1O95813 267 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 TOP3BO95985 862 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 TIMP2P16035 220 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 TPMTP51580 245 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 TKTL1P51854 596 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 NDUFA8P51970 172 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 RAD23BP54727 409 aa11.63□□□□□ -0.55
UBE2D3-211ENST00000502404 WDR4P57081 412 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms