RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CYBBP04839 570 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 PLEKP08567 350 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 H2AFZP0C0S5 128 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 IQCF3P0C7M6 154 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 DARSP14868 501 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 HOXC8P31273 242 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ATICP31939 592 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 LTBRP36941 435 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TNFSF9P41273 254 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ARHGAP25P42331 645 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 OSTNP61366 133 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TFAMQ00059 246 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 MVKQ03426 396 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 GFPT1Q06210 699 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 DLX2Q07687 328 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SMAD2Q15796 467 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CLUL1Q15846 466 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SEZ6Q53EL9 994 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ZBTB41Q5SVQ8 909 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TDRD10Q5VZ19 366 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 LMBRD2Q68DH5 695 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 PPP1R2P3Q6NXS1 205 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CXCL17Q6UXB2 119 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 H2AFVQ71UI9 128 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF571Q7Z3V5 609 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SESTD1Q86VW0 696 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CDR2LQ86X02 465 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF677Q86XU0 584 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM71AQ8IYT1 594 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TRIM58Q8NG06 486 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SHC3Q92529 594 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SEMA4DQ92854 862 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SECISBP2LQ93073 1101 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 FAXDC2Q96IV6 333 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CPB2Q96IY4 423 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SAMD11Q96NU1 681 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ALS2CR12Q96Q35 445 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TSPAN18Q96SJ8 248 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 AGPAT1Q99943 283 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 SEZ6LQ9BYH1 1024 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 CELF4Q9BZC1 486 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 RNF38Q9H0F5 515 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 PDZD7Q9H5P4 517 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 PLEKHA5Q9HAU0 1116 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 IGSF5Q9NSI5 407 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 INTUQ9ULD6 942 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 GINS2Q9Y248 185 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 DERAQ9Y315 318 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 REXO2Q9Y3B8 237 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 TRPV2Q9Y5S1 764 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 UNC79Q9P2D8 2635 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ATP8B3O60423 1300 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 MROH7Q68CQ1 1323 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF292O60281 2723 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 BRWD1Q9NSI6 2320 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 VPS13AQ96RL7 3174 aa5.63□□□□□ -1.51
HMGXB4-208ENST00000498325 ANKRD11Q6UB99 2663 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM186AA6NE01 2351 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 MAP1BP46821 2468 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 A0A087X0T9 212 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 A0A0U1RQG5 324 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 BTNL10A8MVZ5 291 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 LACTBL1A8MY62 500 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 ZNF263O14978 683 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 RTN2O75298 545 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 CSDE1O75534 798 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 RPS6KA5O75582 802 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 SLU7O95391 586 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 VNN1O95497 513 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 NPTXRO95502 500 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 FAM228BP0C875 321 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 GZMAP12544 262 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 KRT5P13647 590 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 P4HA1P13674 534 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TACR2P21452 398 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 ST13P50502 369 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PDE6CP51160 858 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 NAP1L1P55209 391 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TUBB4BP68371 445 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 MRPS6P82932 125 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 DMTNQ08495 405 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 SIGLEC14Q08ET2 396 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 CUL2Q13617 745 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM132DQ14C87 1099 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TAF3Q5VWG9 929 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 RUFY4Q6ZNE9 571 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 EP400NLQ6ZTU2 488 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 DEFB128Q7Z7B8 93 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 RPAINQ86UA6 219 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 HACE1Q8IYU2 909 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 RPUSD2Q8IZ73 545 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC35F6Q8N357 371 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TTC39CQ8N584 583 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 TMEM105Q8N8V8 129 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 OR5B17Q8NGF7 314 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 SLC30A5Q8TAD4 765 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 PABPC5Q96DU9 382 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 GLT1D1Q96MS3 346 aa5.62□□□□□ -1.51
HMGXB4-208ENST00000498325 NOX5Q96PH1 765 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms