RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 FMNL3Q8IVF7 1028 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 ZNF366Q8N895 744 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 BIRC7Q96CA5 298 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 ULBP1Q9BZM6 244 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 TM9SF3Q9HD45 589 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 STOML2Q9UJZ1 356 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 PLA2G4CQ9UP65 541 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 HPSEQ9Y251 543 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 ANKRD6Q9Y2G4 727 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 BPTFQ12830 3046 aa22.72■■□□□ 1.23
CLIC4-204ENST00000497755 TRABD2BA6NFA1 517 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 RHOBTB3O94955 611 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 PRR29P0C7W0 189 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 RPL13P26373 211 aaKnown RBP22.71■■□□□ 1.23
CLIC4-204ENST00000497755 HARS2P49590 506 aaKnown RBP22.71■■□□□ 1.23
CLIC4-204ENST00000497755 RPS14P62263 151 aaKnown RBP22.71■■□□□ 1.23
CLIC4-204ENST00000497755 PDE4CQ08493 712 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 PTPRNQ16849 979 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 FNDC3BQ53EP0 1204 aaKnown RBP22.71■■□□□ 1.23
CLIC4-204ENST00000497755 CHST9Q7L1S5 443 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 TATDN2Q93075 761 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 TMA16Q96EY4 203 aaKnown RBP22.71■■□□□ 1.23
CLIC4-204ENST00000497755 PRSS16Q9NQE7 514 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 SFMBT1Q9UHJ3 866 aa22.71■■□□□ 1.23
CLIC4-204ENST00000497755 CAMK2BQ13554 666 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 TEAD4Q15561 434 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 KCNT1Q5JUK3 1230 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 ZC3H3Q8IXZ2 948 aaKnown RBP22.7■■□□□ 1.22
CLIC4-204ENST00000497755 WFIKKN2Q8TEU8 576 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 SNX21Q969T3 373 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 BTBD1Q9H0C5 482 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 SCUBE2Q9NQ36 999 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 OLA1Q9NTK5 396 aaKnown RBP22.7■■□□□ 1.22
CLIC4-204ENST00000497755 ABCB8Q9NUT2 735 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 RAB20Q9NX57 234 aa22.7■■□□□ 1.22
CLIC4-204ENST00000497755 HBS1LQ9Y450 684 aaKnown RBP22.7■■□□□ 1.22
CLIC4-204ENST00000497755 TNFSF14O43557 240 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 SEMA4FO95754 770 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 GRIA4P48058 902 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 SLC8A3P57103 927 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 ZBTB16Q05516 673 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 CYP4F3Q08477 520 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 ADGRF1Q5T601 910 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 BSPRYQ5W0U4 402 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 LAYNQ6UX15 382 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 GALNT15Q8N3T1 639 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 GUF1Q8N442 669 aaKnown RBP22.69■■□□□ 1.22
CLIC4-204ENST00000497755 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.69■■□□□ 1.22
CLIC4-204ENST00000497755 FBXL13Q8NEE6 735 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 EDEM1Q92611 657 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 IGSF8Q969P0 613 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 ORAI3Q9BRQ5 295 aa22.69■■□□□ 1.22
CLIC4-204ENST00000497755 GCN1Q92616 2671 aaKnown RBP22.68■■□□□ 1.22
CLIC4-204ENST00000497755 H0Y8X5 98 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 PCDHGA12O60330 932 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 CD27P26842 260 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 SGSHP51688 502 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 ZNF445P59923 1031 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 DPYDQ12882 1025 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 SMAD1Q15797 465 aaKnown RBP22.68■■□□□ 1.22
CLIC4-204ENST00000497755 GOLGA7BQ2TAP0 167 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 ZCWPW2Q504Y3 356 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 RNF139Q8WU17 664 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 EEF2KMTQ96G04 330 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 LRIG1Q96JA1 1093 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 BBC3Q96PG8 261 aaPredicted RBP22.68■■□□□ 1.22
CLIC4-204ENST00000497755 LRRC4Q9HBW1 653 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 GGA2Q9UJY4 613 aa22.68■■□□□ 1.22
CLIC4-204ENST00000497755 MUC22E2RYF6 1773 aaPredicted RBP22.68■■□□□ 1.22
CLIC4-204ENST00000497755 FAM149AA5PLN7 773 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 YJEFN3A6XGL0 299 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 E7ENQ6 273 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 XPO1O14980 1071 aaKnown RBP22.67■■□□□ 1.22
CLIC4-204ENST00000497755 FSBPO95073 299 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 DNTTP04053 509 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
CLIC4-204ENST00000497755 DLDP09622 509 aaKnown RBP22.67■■□□□ 1.22
CLIC4-204ENST00000497755 PABPC1P11940 636 aaKnown RBP22.67■■□□□ 1.22
CLIC4-204ENST00000497755 GRK6P43250 576 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 MXI1P50539 228 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 MBLAC2Q68D91 279 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 AHI1Q8N157 1196 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 FBRSQ9HAH7 460 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 TSPAN16Q9UKR8 245 aa22.67■■□□□ 1.22
CLIC4-204ENST00000497755 LATS1O95835 1130 aa22.66■■□□□ 1.22
CLIC4-204ENST00000497755 CTSKP43235 329 aa22.66■■□□□ 1.22
CLIC4-204ENST00000497755 WFDC5Q8TCV5 224 aa22.66■■□□□ 1.22
CLIC4-204ENST00000497755 CCDC47Q96A33 483 aaKnown RBP22.66■■□□□ 1.22
CLIC4-204ENST00000497755 IPO9Q96P70 1041 aaKnown RBP22.66■■□□□ 1.22
CLIC4-204ENST00000497755 SGK2Q9HBY8 427 aa22.66■■□□□ 1.22
CLIC4-204ENST00000497755 SUN2Q9UH99 717 aa22.66■■□□□ 1.22
CLIC4-204ENST00000497755 FAM237AA0A1B0GTK4 181 aa22.65■■□□□ 1.22
CLIC4-204ENST00000497755 MSI1O43347 362 aaKnown RBP22.65■■□□□ 1.22
CLIC4-204ENST00000497755 IGHV4-34P06331 123 aa22.65■■□□□ 1.22
CLIC4-204ENST00000497755 ATP5BP06576 529 aaKnown RBP22.65■■□□□ 1.22
CLIC4-204ENST00000497755 CD70P32970 193 aa22.65■■□□□ 1.22
CLIC4-204ENST00000497755 SYKP43405 635 aa22.65■■□□□ 1.22
CLIC4-204ENST00000497755 CCT8P50990 548 aa22.65■■□□□ 1.22
CLIC4-204ENST00000497755 NDUFA8P51970 172 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms