RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 COPS2P61201 443 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TUBB4BP68371 445 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RUNX3Q13761 415 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 UBXN2BQ14CS0 331 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 SMAD2Q15796 467 aaKnown RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RAP1GAP2Q684P5 730 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 ITPRIPL1Q6GPH6 555 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 C11orf63Q6NUN7 778 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 SMRP1Q8NCR6 262 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 NTAN1Q96AB6 310 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 HSD3B7Q9H2F3 369 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 HCFC1R1Q9NWW0 138 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 NCKAP1Q9Y2A7 1128 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 BDP1A6H8Y1 2624 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 KCNK3O14649 394 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 ACADMP11310 421 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 OR1E1P30953 314 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RFC1P35251 1148 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 EPHA5P54756 1037 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 PRKCQQ04759 706 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RAB41Q5JT25 222 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 PPP1R15BQ5SWA1 713 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RSPO2Q6UXX9 243 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TAC4Q86UU9 113 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TTC9BQ8N6N2 239 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 PNKPQ96T60 521 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 POLMQ9NP87 494 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 RCOR3Q9P2K3 495 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 OR12D3Q9UGF7 316 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TTLL3Q9Y4R7 772 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 NEDD8-MDP1E9PL57 170 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 ADRA1BP35368 520 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 MAGEA9P43362 315 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 CDH4P55283 916 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 LONRF2Q1L5Z9 754 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 KAZNQ674X7 775 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 SYCE2Q6PIF2 218 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 ANKS1BQ7Z6G8 1248 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 ADAM32Q8TC27 787 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TEKT4Q8WW24 435 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 CD101Q93033 1021 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 FRMD8P1Q9BZ68 369 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 POMKQ9H5K3 350 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 CFAP69A5D8W1 941 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 TMEM191CA6NGB0 347 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 URI1O94763 535 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 WEE1P30291 646 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 MAPK8P45983 427 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 MAPKAPK2P49137 400 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 EPHB1P54762 984 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 YBEYP58557 167 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 SLC20A2Q08357 652 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 CCDC14Q49A88 953 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 FNDC3BQ53EP0 1204 aaKnown RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 RALGPS2Q86X27 583 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 OSCP1Q8WVF1 389 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 CFAP57Q96MR6 1250 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 RHOQP17081 205 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 CHRNB2P17787 502 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 TTC31Q49AM3 519 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 EOGTQ5NDL2 527 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 POLNQ7Z5Q5 900 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 ITFG1Q8TB96 612 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 FCRL2Q96LA5 508 aaPredicted RBP8.9□□□□□ -0.98
U2AF1-212ENST00000496462 PCDHB18PQ96TA0 734 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 IRF2BPLQ9H1B7 796 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 ATP13A1Q9HD20 1204 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 VANGL2Q9ULK5 521 aa8.9□□□□□ -0.98
U2AF1-212ENST00000496462 C2CD4BA6NLJ0 364 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 PI4K2BG5E9Z4 385 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 DFFAO00273 331 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 MDM4O15151 490 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 BNIP3LO60238 219 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 PAGE1O75459 146 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 CALCAP01258 141 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 L1CAMP32004 1257 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 RBM10P98175 930 aaKnown RBP8.9□□□□□ -0.99
U2AF1-212ENST00000496462 EIF4HQ15056 248 aaKnown RBP8.9□□□□□ -0.99
U2AF1-212ENST00000496462 C2CD6Q53TS8 623 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 FAM46CQ5VWP2 391 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 OLFML1Q6UWY5 402 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 CCHCR1Q8TD31 782 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 BHMTQ93088 406 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 SLC2A13Q96QE2 648 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 P2RY13Q9BPV8 354 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 SLC46A2Q9BY10 475 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 SEPT10Q9P0V9 454 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 EPS15L1Q9UBC2 864 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 DNAI1Q9UI46 699 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 RAD54BQ9Y620 910 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 ALG6Q9Y672 507 aa8.9□□□□□ -0.99
U2AF1-212ENST00000496462 BTNL10A8MVZ5 291 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 F8W8V4 182 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 NEMP1O14524 444 aa8.89□□□□□ -0.99
U2AF1-212ENST00000496462 PSMD3O43242 534 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms