RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SGSHP51688 502 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 PITX1P78337 314 aaPredicted RBP21.42■■□□□ 1.02
COL9A2-211ENST00000496215 PIK3R6Q5UE93 754 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 NADSYN1Q6IA69 706 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 KBTBD6Q86V97 674 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 HJURPQ8NCD3 748 aaPredicted RBP21.42■■□□□ 1.02
COL9A2-211ENST00000496215 SLC20A1Q8WUM9 679 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 HMGB4Q8WW32 186 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 PRICKLE1Q96MT3 831 aaPredicted RBP21.42■■□□□ 1.02
COL9A2-211ENST00000496215 ACOX2Q99424 681 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 FUCA2Q9BTY2 467 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 CACNA2D2Q9NY47 1150 aa21.42■■□□□ 1.02
COL9A2-211ENST00000496215 SYNJ2BP-COX16A0A087WUM0 186 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 FAM170AA1A519 330 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 TBL1XO60907 577 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 RETP07949 1114 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 GBP1P32455 592 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 NOMO3P69849 1222 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 CDR2Q01850 454 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 SPEM2Q0P670 501 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 E2F5Q15329 346 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 USP39Q53GS9 565 aaKnown RBP21.41■■□□□ 1.02
COL9A2-211ENST00000496215 ZC3H12AQ5D1E8 599 aaKnown RBP21.41■■□□□ 1.02
COL9A2-211ENST00000496215 MPP7Q5T2T1 576 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 ERICH1Q86X53 443 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 ZNF557Q8N988 423 aaPredicted RBP21.41■■□□□ 1.02
COL9A2-211ENST00000496215 ZNF397Q8NF99 534 aaPredicted RBP21.41■■□□□ 1.02
COL9A2-211ENST00000496215 BTN2A3PQ96KV6 586 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 GABRG3Q99928 467 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 CIPCQ9C0C6 399 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 NUCKS1Q9H1E3 243 aaKnown RBP21.41■■□□□ 1.02
COL9A2-211ENST00000496215 COX16Q9P0S2 106 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 PLXND1Q9Y4D7 1925 aa21.41■■□□□ 1.02
COL9A2-211ENST00000496215 NPC1O15118 1278 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 SLC2A3P11169 496 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 GABRB2P47870 512 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 ARID5AQ03989 594 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 FAM102AQ5T9C2 384 aaPredicted RBP21.4■■□□□ 1.02
COL9A2-211ENST00000496215 NAA35Q5VZE5 725 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 C11orf74Q86VG3 221 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 CHSY1Q86X52 802 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 PGBD3Q8N328 593 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 GPR161Q8N6U8 529 aaKnown RBP21.4■■□□□ 1.02
COL9A2-211ENST00000496215 ATP6V0D2Q8N8Y2 350 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 WFIKKN2Q8TEU8 576 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 RMDN1Q96DB5 314 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 C18orf8Q96DM3 657 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 CD248Q9HCU0 757 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 ABCB8Q9NUT2 735 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.4■■□□□ 1.02
COL9A2-211ENST00000496215 INVSQ9Y283 1065 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 CACNA1AO00555 2505 aa21.4■■□□□ 1.02
COL9A2-211ENST00000496215 A0A1W2PQF6 199 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 ZBTB24O43167 697 aaPredicted RBP21.39■■□□□ 1.01
COL9A2-211ENST00000496215 ABCB4P21439 1286 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 HLA-FP30511 346 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 CCR1P32246 355 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 NOS2P35228 1153 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 SCNN1AP37088 669 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 ELF2Q15723 593 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 FILIP1LQ4L180 1135 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 MS4A13Q5J8X5 152 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 RNF43Q68DV7 783 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 XYLT1Q86Y38 959 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 MFN1Q8IWA4 741 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 AHI1Q8N157 1196 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.39■■□□□ 1.01
COL9A2-211ENST00000496215 CPA5Q8WXQ8 436 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 RNF34Q969K3 372 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 SPACA7Q96KW9 195 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 ELOVL2Q9NXB9 296 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 STIM2Q9P246 746 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 SLC12A6Q9UHW9 1150 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 XPO7Q9UIA9 1087 aaKnown RBP21.39■■□□□ 1.01
COL9A2-211ENST00000496215 GGA2Q9UJY4 613 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 STAP1Q9ULZ2 295 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 USP18Q9UMW8 372 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 RAD54BQ9Y620 910 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 STON1Q9Y6Q2 735 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 RALGAPA1Q6GYQ0 2036 aa21.39■■□□□ 1.01
COL9A2-211ENST00000496215 LRP3O75074 770 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 PABPC1P11940 636 aaKnown RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 MATKP42679 507 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 FMO1Q01740 532 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 NME3Q13232 169 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 EIF4EBP2Q13542 120 aaPredicted RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 STARD3Q14849 445 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 PLK5Q496M5 336 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 RAP1GAP2Q684P5 730 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 TRIM72Q6ZMU5 477 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 CCDC117Q8IWD4 279 aaPredicted RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 OLIG1Q8TAK6 271 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 LOXL4Q96JB6 756 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 ZC3H10Q96K80 434 aaKnown RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 DUSP15Q9H1R2 295 aaPredicted RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 RRN3Q9NYV6 651 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 THAP10Q9P2Z0 257 aaPredicted RBP21.38■■□□□ 1.01
COL9A2-211ENST00000496215 ABCA7Q8IZY2 2146 aa21.38■■□□□ 1.01
COL9A2-211ENST00000496215 KCNU1A8MYU2 1149 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms