RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 KRT14P02533 472 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 C8AP07357 584 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 MYOGP15173 224 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 STIP1P31948 543 aaKnown RBP25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 ERVK-21P61565 698 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 CALCOCO2Q13137 446 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 COL13A1Q5TAT6 717 aaPredicted RBP25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 NUGGCQ68CJ6 796 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 DARS2Q6PI48 645 aaKnown RBP25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 NPNTQ6UXI9 565 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 C1orf74Q96LT6 269 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 CCSER2Q9H7U1 834 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 NFU1Q9UMS0 254 aa25.21■■□□□ 1.63
PPP1R3F-205ENST00000495799 GRXCR1A8MXD5 290 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 I6L893 689 aaPredicted RBP25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 SERPINB6P35237 376 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 PAFAH1B3Q15102 231 aaKnown RBP25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 BEND6Q5SZJ8 279 aaPredicted RBP25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 MIB1Q86YT6 1006 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 UNC45BQ8IWX7 931 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 AENQ8WTP8 325 aaKnown RBP25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 SNF8Q96H20 258 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 BTN2A3PQ96KV6 586 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 TMEM121Q9BTD3 319 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 CATSPERBQ9H7T0 1116 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 PCDH9Q9HC56 1237 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 WHRNQ9P202 907 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 SNX24Q9Y343 169 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 NEU2Q9Y3R4 380 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 CLUHO75153 1309 aa25.2■■□□□ 1.62
PPP1R3F-205ENST00000495799 HIDE1A8MVS5 230 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 HACD1B0YJ81 288 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 DCLK1O15075 740 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 FGF10O15520 208 aaPredicted RBP25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 IGLV3-27P01718 113 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 DNAJB1P25685 340 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 TBC1D31Q96DN5 1066 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 FERMT1Q9BQL6 677 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 SIK2Q9H0K1 926 aa25.19■■□□□ 1.62
PPP1R3F-205ENST00000495799 FAM72CH0Y354 149 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 LRIG2O94898 1065 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 TBX18O95935 607 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 MOCS2O96007 188 aaPredicted RBP25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 SPATA31D3P0C874 917 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 MYBL2P10244 700 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 ERCC2P18074 760 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 ITIH2P19823 946 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 EPHB2P29323 1055 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 ADCY8P40145 1251 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 COG7P83436 770 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 CAV1Q03135 178 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 GPM6BQ13491 265 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 RAB30Q15771 203 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 FAM72AQ5TYM5 149 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 FAM72DQ6L9T8 149 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 ELMSAN1Q6PJG2 1045 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 SPATA31D4Q6ZUB0 917 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 ZC3H18Q86VM9 953 aaKnown RBP25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 FAM72BQ86X60 149 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 DDX42Q86XP3 938 aaKnown RBP eCLIP25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 GSPT2Q8IYD1 628 aaKnown RBP25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 LRRC45Q96CN5 670 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 DONSONQ9NYP3 566 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 MTRF1LQ9UGC7 380 aaKnown RBP25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 DPP7Q9UHL4 492 aa25.18■■□□□ 1.62
PPP1R3F-205ENST00000495799 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 BCLAF3A2AJT9 711 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 H3BNC9 293 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 GRM6O15303 877 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 ATP8B1O43520 1251 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 HOXC13P31276 330 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 ACTN2P35609 894 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 RPL21P46778 160 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 CLCN4P51793 760 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 PPM1LQ5SGD2 360 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 FAM109BQ6ICB4 259 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 CAVIN3Q969G5 261 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 PLD4Q96BZ4 506 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 GCNAQ96QF7 691 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 MSRAQ9UJ68 235 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 MTCL1Q9Y4B5 1905 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 PPP1R12AO14974 1030 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 NCAM2O15394 837 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 ARHGEF15O94989 841 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 TNNT3P45378 269 aaPredicted RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 GBE1Q04446 702 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 PDK1Q15118 436 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 SLC45A4Q5BKX6 768 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 LRRC31Q6UY01 552 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 MTERF4Q7Z6M4 381 aaKnown RBP25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 ETNK2Q9NVF9 386 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 DTLQ9NZJ0 730 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 HS3ST4Q9Y661 456 aa25.17■■□□□ 1.62
PPP1R3F-205ENST00000495799 IFNB1P01574 187 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 MLLT6P55198 1093 aaPredicted RBP25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 TRADDQ15628 312 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 TRIP13Q15645 432 aaPredicted RBP25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 MANEALQ5VSG8 457 aa25.16■■□□□ 1.62
PPP1R3F-205ENST00000495799 RWDD4Q6NW29 188 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms