RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 CAMK4Q16566 473 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 MPPE1Q53F39 396 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 SDE2Q6IQ49 451 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 ADIPOR2Q86V24 386 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 ADAM32Q8TC27 787 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 DQX1Q8TE96 717 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 TOE1Q96GM8 510 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 ABCB8Q9NUT2 735 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 XPO7Q9UIA9 1087 aaKnown RBP12.13□□□□□ -0.47
VTI1A-208ENST00000494728 ANGPTL2Q9UKU9 493 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 CNTN6Q9UQ52 1028 aa12.13□□□□□ -0.47
VTI1A-208ENST00000494728 PTPRBP23467 1997 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 PAPSS1O43252 624 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 KRT5P13647 590 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 HOXD12P35452 270 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 PPP1R2P41236 205 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 TPMTP51580 245 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 SHC2P98077 582 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 LMAN2Q12907 356 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 STARD3Q14849 445 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 EIF4HQ15056 248 aaKnown RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 ADGRF1Q5T601 910 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 DAB2IPQ5VWQ8 1189 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 SERPINA13PQ6UXR4 307 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 CHST9Q7L1S5 443 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 KIAA0907Q7Z7F0 614 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 TAC4Q86UU9 113 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 ZNF419Q96HQ0 510 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 LMLNQ96KR4 655 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 FCRL2Q96LA5 508 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 GTPBP2Q9BX10 602 aaKnown RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 NUSAP1Q9BXS6 441 aaKnown RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 SLC2A11Q9BYW1 496 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 MTG2Q9H4K7 406 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 WSB2Q9NYS7 404 aaPredicted RBP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 NAALADL1Q9UQQ1 740 aa12.12□□□□□ -0.47
VTI1A-208ENST00000494728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
VTI1A-208ENST00000494728 DOCK4Q8N1I0 1966 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 E5RJQ4 531 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 LATS1O95835 1130 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 EPHX1P07099 455 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SERPINF2P08697 491 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 PNMA6AP0CW24 399 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 PABPC1P11940 636 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SLC9A1P19634 815 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 CD6P30203 668 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 TBX4P57082 545 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 RPS24P62847 133 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 FAM193AP78312 1265 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SEMA3BQ13214 749 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 PIK3R6Q5UE93 754 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SYPL2Q5VXT5 272 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 TRIM65Q6PJ69 517 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 MMS22LQ6ZRQ5 1243 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 ZCCHC9Q8N567 271 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 MINDY1Q8N5J2 469 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 MYO19Q96H55 970 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SLC39A13Q96H72 371 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 GPR174Q9BXC1 333 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 TMEM245Q9H330 911 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 UBE2TQ9NPD8 197 aaPredicted RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 ST7Q9NRC1 585 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SLC6A14Q9UN76 642 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
VTI1A-208ENST00000494728 SMG1Q96Q15 3661 aaKnown RBP12.1□□□□□ -0.47
VTI1A-208ENST00000494728 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 NPC1O15118 1278 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 ACSL4O60488 711 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 TBL1XO60907 577 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 GJB3O75712 270 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 LETM1O95202 739 aaPredicted RBP12.1□□□□□ -0.47
VTI1A-208ENST00000494728 GNA14O95837 355 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 NUMBP49757 651 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 BNC1Q01954 994 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 RING1Q06587 406 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 CETN1Q12798 172 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 FOXC1Q12948 553 aa12.1□□□□□ -0.47
VTI1A-208ENST00000494728 GRIK2Q13002 908 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms