RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 SLCO6A1Q86UG4 719 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 MARCH9Q86YJ5 346 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 CCDC117Q8IWD4 279 aaPredicted RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 AHI1Q8N157 1196 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 CPXM2Q8N436 756 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 ANKRD52Q8NB46 1076 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 UBA3Q8TBC4 463 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 GOLGA1Q92805 767 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 SNX21Q969T3 373 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 TMA16Q96EY4 203 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 CDC6Q99741 560 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 TSG101Q99816 390 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 SLC2A11Q9BYW1 496 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 BTBD1Q9H0C5 482 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 GGA2Q9UJY4 613 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 RAXQ9Y2V3 346 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 SNX11Q9Y5W9 270 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 URB1O60287 2271 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 FAM149AA5PLN7 773 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 TAF4O00268 1085 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 XPO1O14980 1071 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 TBL1XO60907 577 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 ATP5BP06576 529 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 ATXN1LP0C7T5 689 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 PABPC1P11940 636 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 HOXD9P28356 352 aaPredicted RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 HLA-FP30511 346 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 GTF2H1P32780 548 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 RGS7P49802 495 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 CCT8P50990 548 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 YWHAEP62258 255 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 BST2Q10589 180 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 DPYDQ12882 1025 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 KIF19Q2TAC6 998 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 BSPRYQ5W0U4 402 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 MBLAC2Q68D91 279 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 RFWD3Q6PCD5 774 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 CCNI2Q6ZMN8 369 aaPredicted RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 MFN1Q8IWA4 741 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 GUF1Q8N442 669 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 WFIKKN2Q8TEU8 576 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 LRIG1Q96JA1 1093 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 NCKAP1Q9Y2A7 1128 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 ANKRD6Q9Y2G4 727 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 HBS1LQ9Y450 684 aaKnown RBP10.04□□□□□ -0.8
UBR4-216ENST00000494503 NFE2L3Q9Y4A8 694 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 SLCO1B1Q9Y6L6 691 aa10.04□□□□□ -0.8
UBR4-216ENST00000494503 CELSR3Q9NYQ7 3312 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 YJEFN3A6XGL0 299 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 E7ENQ6 273 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
UBR4-216ENST00000494503 PLXNA2O75051 1894 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 SLC11A2P49281 568 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 NUMBP49757 651 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 SGSHP51688 502 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ZNF445P59923 1031 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 BNC1Q01954 994 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 CAMK2GQ13555 558 aaPredicted RBP10.03□□□□□ -0.8
UBR4-216ENST00000494503 CUL2Q13617 745 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 CDH18Q13634 790 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ENPP2Q13822 863 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 TRIP4Q15650 581 aaPredicted RBP10.03□□□□□ -0.8
UBR4-216ENST00000494503 NFIL3Q16649 462 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 RAB41Q5JT25 222 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ADGRF1Q5T601 910 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ZNF776Q68DI1 518 aaPredicted RBP10.03□□□□□ -0.8
UBR4-216ENST00000494503 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 PDZD3Q86UT5 571 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ZNF276Q8N554 614 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 TM9SF3Q9HD45 589 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 AASDHPPTQ9NRN7 309 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 FTSJ1Q9UET6 329 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 HPSEQ9Y251 543 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 BTBD3Q9Y2F9 522 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.03□□□□□ -0.8
UBR4-216ENST00000494503 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
UBR4-216ENST00000494503 KNTC1P50748 2209 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 MUC22E2RYF6 1773 aaPredicted RBP10.02□□□□□ -0.81
UBR4-216ENST00000494503 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 FAM221BA6H8Z2 402 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 M0QYV0 167 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 CBFA2T3O75081 653 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 RNASEH2AO75792 299 aaKnown RBP10.02□□□□□ -0.81
UBR4-216ENST00000494503 MOCS2O96007 188 aaPredicted RBP10.02□□□□□ -0.81
UBR4-216ENST00000494503 IGLV3-19P01714 112 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.81
UBR4-216ENST00000494503 ZNF883P0CG24 379 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 ABCB4P21439 1286 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 CD70P32970 193 aa10.02□□□□□ -0.81
UBR4-216ENST00000494503 GRK6P43250 576 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms