RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SERAC1Q96JX3 654 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 PEBP4Q96S96 227 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 SLC9A7Q96T83 725 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CPNE1Q99829 537 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 KCNK13Q9HB14 408 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 DNAJC28Q9NX36 388 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 UBQLN1Q9UMX0 589 aaKnown RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 TRIM33Q9UPN9 1127 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 AKT3Q9Y243 479 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 HBS1LQ9Y450 684 aaKnown RBP11.84□□□□□ -0.51
RFC4-214ENST00000494047 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 CDY1Q9Y6F8 540 aa11.84□□□□□ -0.51
RFC4-214ENST00000494047 TCRBV7S3A2A0A539 114 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 MAGEA13PA6NCF6 341 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 A6NHS1 94 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 A8MUI8 341 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 PSMD3O43242 534 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 RFPL1O75677 317 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 C1QAP02745 245 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 POLBP06746 335 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 CYP3A5P20815 502 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 RBL1P28749 1068 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 ADSLP30566 484 aaPredicted RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 RAP1GAPP47736 663 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 POLD2P49005 469 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 ZNF33AQ06730 810 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 BST1Q10588 318 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 SF3A3Q12874 501 aaKnown RBP eCLIP11.83□□□□□ -0.52
RFC4-214ENST00000494047 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 PLEKHG4Q58EX7 1191 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 HP1BP3Q5SSJ5 553 aaPredicted RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 GRTP1Q5TC63 336 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 SNX30Q5VWJ9 437 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 MTHFD1LQ6UB35 978 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 UNC5AQ6ZN44 842 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 LRRC74BQ6ZQY2 392 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 CAND1Q86VP6 1230 aaKnown RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 TRIM50Q86XT4 487 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 ANKRD52Q8NB46 1076 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 RFWD2Q8NHY2 731 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 GABPB2Q8TAK5 448 aaPredicted RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 RDH11Q8TC12 318 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 SLC35F5Q8WV83 523 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 HTR3CQ8WXA8 447 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 ISL2Q96A47 359 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 VAT1Q99536 393 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 ZNF184Q99676 751 aaPredicted RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
RFC4-214ENST00000494047 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 TAS2R1Q9NYW7 299 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 IGSF9Q9P2J2 1179 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 AP4E1Q9UPM8 1137 aa11.83□□□□□ -0.52
RFC4-214ENST00000494047 RBM47A0AV96 593 aaKnown RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 FOXO6A8MYZ6 492 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 TMEM114B3SHH9 223 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SLCO1B7G3V0H7 640 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 DAB1O75553 588 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 FBXO21O94952 628 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 LGALS2P05162 132 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 MPOP05164 745 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 ALOX15P16050 662 aaPredicted RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 GP5P40197 560 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SERPINB8P50452 374 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 DEUP1Q05D60 604 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 HIC1Q14526 733 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 RCN1Q15293 331 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 CHI3L2Q15782 390 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 KCTD19Q17RG1 926 aaPredicted RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 SLC10A6Q3KNW5 377 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 TMCO4Q5TGY1 634 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SCYL2Q6P3W7 929 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SLC27A1Q6PCB7 646 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 TMEM126BQ8IUX1 230 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 NDUFAF2Q8N183 169 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 PCDH19Q8TAB3 1148 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SPDL1Q96EA4 605 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 SIGLEC10Q96LC7 697 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 OLFM3Q96PB7 478 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 TWNKQ96RR1 684 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 ARL8BQ9NVJ2 186 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFC4-214ENST00000494047 SAE1Q9UBE0 346 aaPredicted RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 PPARGC1AQ9UBK2 798 aaKnown RBP11.82□□□□□ -0.52
RFC4-214ENST00000494047 HEY1Q9Y5J3 304 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 MAD1L1Q9Y6D9 718 aa11.82□□□□□ -0.52
RFC4-214ENST00000494047 BRCA2P51587 3418 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms