RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KIAA0319LQ8IZA0 1049 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 SUN3Q8TAQ9 357 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 ELP5Q8TE02 316 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 LRTOMTQ8WZ04 291 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 P2RY11Q96G91 374 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 SNX22Q96L94 193 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 WNT16Q9UBV4 365 aa4.84□□□□□ -1.63
SMC4-223ENST00000493695 G3BP2Q9UN86 482 aaKnown RBP4.84□□□□□ -1.63
SMC4-223ENST00000493695 TSPAN6O43657 245 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 CCNT2O60583 730 aaKnown RBP4.83□□□□□ -1.64
SMC4-223ENST00000493695 AGTR2P50052 363 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 DSCR9P59020 149 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 SEMA3BQ13214 749 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 SLC4A8Q2Y0W8 1093 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 INO80DQ53TQ3 878 aaPredicted RBP4.83□□□□□ -1.64
SMC4-223ENST00000493695 WASHC2DQ5SRD0 308 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 LRIG3Q6UXM1 1119 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 Q6ZTK2 550 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 DDIASQ8IXT1 998 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 SDR16C5Q8N3Y7 309 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 ABHD5Q8WTS1 349 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 PMM1Q92871 262 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 FAM227BQ96M60 508 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 SLITRK1Q96PX8 696 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 C6orf106Q9H6K1 298 aaPredicted RBP4.83□□□□□ -1.64
SMC4-223ENST00000493695 TASP1Q9H6P5 420 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
SMC4-223ENST00000493695 GJB4Q9NTQ9 266 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 PLK2Q9NYY3 685 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 PCDHGB1Q9Y5G3 927 aa4.83□□□□□ -1.64
SMC4-223ENST00000493695 FRS3O43559 492 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 ZNF432O94892 652 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 MT-ND5P03915 603 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 MATN1P21941 496 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 ATICP31939 592 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 STAT6P42226 847 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 PCYT1AP49585 367 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 COMPP49747 757 aaPredicted RBP4.82□□□□□ -1.64
SMC4-223ENST00000493695 KCNJ12Q14500 433 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 KIAA0753Q2KHM9 967 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 OTUD3Q5T2D3 398 aaPredicted RBP4.82□□□□□ -1.64
SMC4-223ENST00000493695 FAM102BQ5T8I3 360 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 ISM2Q6H9L7 571 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 GSG1LQ6UXU4 331 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 KYAT3Q6YP21 454 aaKnown RBP4.82□□□□□ -1.64
SMC4-223ENST00000493695 TCEAL8Q8IYN2 117 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 FAM47BQ8NA70 645 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 GJA10Q969M2 543 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 WDR83Q9BRX9 315 aaKnown RBP4.82□□□□□ -1.64
SMC4-223ENST00000493695 SELENOOQ9BVL4 669 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 TM6SF1Q9BZW5 370 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 ISCUQ9H1K1 167 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 AS3MTQ9HBK9 375 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 CHPF2Q9P2E5 772 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 ERRFI1Q9UJM3 462 aaPredicted RBP4.82□□□□□ -1.64
SMC4-223ENST00000493695 LAMP3Q9UQV4 416 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 CKAP5Q14008 2032 aa4.82□□□□□ -1.64
SMC4-223ENST00000493695 NFATC1O95644 943 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 SCGB1D2O95969 90 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 MYF5P13349 255 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 MMP8P22894 467 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 GSTM5P46439 218 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 POLD3Q15054 466 aaPredicted RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 PPP2R5AQ15172 486 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 MINDY4Q4G0A6 757 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 TMEM196Q5HYL7 178 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 CTU1Q7Z7A3 348 aaKnown RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 TMPRSS12Q86WS5 348 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 C7orf57Q8NEG2 295 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 RUNDC1Q96C34 613 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 APIPQ96GX9 242 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 ZNF845Q96IR2 970 aaPredicted RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 GATA5Q9BWX5 397 aaPredicted RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 CDT1Q9H211 546 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 RMI1Q9H9A7 625 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 CD93Q9NPY3 652 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 C1orf112Q9NSG2 853 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 SIRT3Q9NTG7 399 aaPredicted RBP4.81□□□□□ -1.64
SMC4-223ENST00000493695 TCEAL9Q9UHQ7 104 aa4.81□□□□□ -1.64
SMC4-223ENST00000493695 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 ZSCAN9O15535 394 aaPredicted RBP4.8□□□□□ -1.64
SMC4-223ENST00000493695 COQ9O75208 318 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 CYP1A2P05177 515 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 ALADP13716 330 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 RFX2P48378 723 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 ZNF84P51523 738 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 DARS2Q6PI48 645 aaKnown RBP4.8□□□□□ -1.64
SMC4-223ENST00000493695 CYB5R4Q7L1T6 521 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 WFIKKN2Q8TEU8 576 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 INPP5DQ92835 1189 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 LRRC46Q96FV0 321 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 GPR78Q96P69 363 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 ABHD14AQ9BUJ0 271 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 CDCP1Q9H5V8 836 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
SMC4-223ENST00000493695 SNX13Q9Y5W8 968 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms