RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 FBXO39Q8N4B4 442 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 OR6Y1Q8NGX8 325 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 ASB7Q9H672 318 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 ACTL7BQ9Y614 415 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 C1orf167Q5SNV9 1468 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 H3BMM5 538 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 MRASO14807 208 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 RPL21P46778 160 aaKnown RBP20.58■□□□□ 0.89
RNF40-203ENST00000493683 TBX2Q13207 712 aaPredicted RBP20.58■□□□□ 0.89
RNF40-203ENST00000493683 CROCCP3Q8IVE0 287 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 B3GALNT2Q8NCR0 500 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 NT5MQ9NPB1 228 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 GGA2Q9UJY4 613 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 PDE9AO76083 593 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 CLTBP09497 229 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 NME5P56597 212 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 PXMP2Q9NR77 195 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 KLK14Q9P0G3 267 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 VPS28Q9UK41 221 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 TMCO1Q9UM00 188 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 FYNP06241 537 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 GSTM1P09488 218 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 GTF2A2P52657 109 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 FBXO44Q9H4M3 255 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 RBM22Q9NW64 420 aaKnown RBP eCLIP20.58■□□□□ 0.884e-7■■□□□ 11.6
RNF40-203ENST00000493683 TAS2R13Q9NYV9 303 aa20.58■□□□□ 0.88
RNF40-203ENST00000493683 UBA2Q9UBT2 640 aaPredicted RBP20.58■□□□□ 0.88
RNF40-203ENST00000493683 GCLCP48506 637 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 TKTL1P51854 596 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 PLIN5Q00G26 463 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 GLRA4Q5JXX5 417 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 MIB1Q86YT6 1006 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 DAPK2Q9UIK4 370 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 FAM25AB3EWG3 89 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 FAM25CB3EWG5 89 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 FAM25GB3EWG6 89 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TGFB3P10600 412 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 ZNF7P17097 686 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 RAB27AP51159 221 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TOP3AQ13472 1001 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 MEA1Q16626 185 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 L3MBTL3Q96JM7 780 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 CLEC4MQ9H2X3 399 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 MAPRE3Q9UPY8 281 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 SF3B1O75533 1304 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■■■■■ 90.2
RNF40-203ENST00000493683 USP32Q8NFA0 1604 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TSPOAP1O95153 1857 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 FCGRTP55899 365 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 COX10Q12887 443 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 AMHR2Q16671 573 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TIMM50Q3ZCQ8 353 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TMEM119Q4V9L6 283 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 METTL7BQ6UX53 244 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 HPS4Q9NQG7 708 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 TLR8Q9NR97 1041 aaKnown RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 CCDC154A6NI56 674 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 FAM47E-STBD1D6RA91 191 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 RAG1P15918 1043 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 NTRK3Q16288 839 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 SEZ6Q53EL9 994 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 RETSATQ6NUM9 610 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 CARNMT1Q8N4J0 409 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 WDR36Q8NI36 951 aaKnown RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 ZNF75CPQ92670 426 aaPredicted RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 POP5Q969H6 163 aaKnown RBP20.57■□□□□ 0.88
RNF40-203ENST00000493683 BTBD7Q9P203 1132 aa20.57■□□□□ 0.88
RNF40-203ENST00000493683 SMIM31A0A1B0GVY4 71 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SLC12A8A0AV02 714 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 JAK1P23458 1154 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 IFNGR2P38484 337 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ERVK-9P63128 1117 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 FRG1Q14331 258 aaKnown RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 CTXN3Q4LDR2 81 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ZPBP2Q6X784 338 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 NEK10Q6ZWH5 1172 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 NT5DC3Q86UY8 548 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 TMEM132CQ8N3T6 1108 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ITGB1BP2Q9UKP3 347 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ERI2A8K979 691 aaKnown RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 CLCN3P51790 818 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 HUNKP57058 714 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 TAB1Q15750 504 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SHROOM1Q2M3G4 852 aaPredicted RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 PDZK1Q5T2W1 519 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 FAM228AQ86W67 206 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SLC44A2Q8IWA5 706 aaPredicted RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 KATNAL2Q8IYT4 538 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ZNF606Q8WXB4 792 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ACOX2Q99424 681 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 SYNDIG1Q9H7V2 258 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 A0A096LPK6 155 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 PCNAP12004 261 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ETS1P14921 441 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 PPIDQ08752 370 aaKnown RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 SLC45A4Q5BKX6 768 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 C11orf74Q86VG3 221 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 DHRSXQ8N5I4 330 aa20.56■□□□□ 0.88
RNF40-203ENST00000493683 ZCCHC2Q9C0B9 1178 aaKnown RBP20.56■□□□□ 0.88
RNF40-203ENST00000493683 IPPQ9Y573 584 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms