RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TUBGCP2Q9BSJ2 902 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 NUP58Q9BVL2 599 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 NDST4Q9H3R1 872 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 SMOC1Q9H4F8 434 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 ABCB8Q9NUT2 735 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 RAD54BQ9Y620 910 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 ZNF292O60281 2723 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
PDLIM2-217ENST00000491330 IGHV1OR15-9A0A0B4J2B8 117 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 ANTXRLA6NF34 631 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 C4orf47A7E2U8 309 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 MEI4A8MW99 385 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 H0Y626 953 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 ASLP04424 464 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 HOXD9P28356 352 aaPredicted RBP17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 PIK3R6Q5UE93 754 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 KIAA1211LQ6NV74 962 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 DENND1BQ6P3S1 775 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 SLC23A3Q6PIS1 610 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 ZDHHC17Q8IUH5 632 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 DQX1Q8TE96 717 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 PPP1R13BQ96KQ4 1090 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 BTN2A3PQ96KV6 586 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 LSM14BQ9BX40 385 aaKnown RBP17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 ITM2CQ9NQX7 267 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 STIM2Q9P246 746 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 PAXBP1Q9Y5B6 917 aa17.2■□□□□ 0.34
PDLIM2-217ENST00000491330 WASH3PC4AMC7 463 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 MOCS2O96007 188 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ADRB1P08588 477 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 SERPINF2P08697 491 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 EEF1GP26641 437 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 PON1P27169 355 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 IL12RB1P42701 662 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 PTGER3P43115 390 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 RPL34P49207 117 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 IRX4P78413 519 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ZBTB16Q05516 673 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 UAP1L1Q3KQV9 507 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 DPCR1Q3MIW9 517 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 FUT11Q495W5 492 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 TTC31Q49AM3 519 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 DCAF6Q58WW2 860 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 MBLAC2Q68D91 279 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 TCEAL6Q6IPX3 200 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 SND1Q7KZF4 910 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 CADM4Q8NFZ8 388 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 OR2T3Q8NH03 318 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ENOX1Q8TC92 643 aaKnown RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 SHC3Q92529 594 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 TCEAL3Q969E4 200 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 HSPA12BQ96MM6 686 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 LHX5Q9H2C1 402 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 FAM204AQ9H8W3 233 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ASNSD1Q9NWL6 643 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 KIAA1522Q9P206 1035 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 MBD1Q9UIS9 605 aaPredicted RBP17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 PILRBQ9UKJ0 227 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 NAALADL1Q9UQQ1 740 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 NCKAP1Q9Y2A7 1128 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 ATG2BQ96BY7 2078 aa17.19■□□□□ 0.34
PDLIM2-217ENST00000491330 MYO15AQ9UKN7 3530 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 LNP1A1A4G5 178 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 E5RJQ4 531 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 F5H5T6 163 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 HSF2BPO75031 334 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 IGLV3-27P01718 113 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 DNTTP04053 509 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CHRM1P11229 460 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 PTMSP20962 102 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 ITPKAP23677 461 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CCR1P32246 355 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 PDCLQ13371 301 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 ENPP2Q13822 863 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 RAPGEF1Q13905 1077 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 FKBP15Q5T1M5 1219 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 TTC39BQ5VTQ0 682 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 OR6B2Q6IFH4 312 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 RFWD3Q6PCD5 774 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 SASS6Q6UVJ0 657 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 C11orf57Q6ZUT1 292 aaPredicted RBP17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CHSY1Q86X52 802 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CARNMT1Q8N4J0 409 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 TMEM35BQ8NCS4 154 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 FIBINQ8TAL6 211 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 CLEC4CQ8WTT0 213 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 ERLEC1Q96DZ1 483 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 GTPBP2Q9BX10 602 aaKnown RBP17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 PCED1AQ9H1Q7 454 aa17.18■□□□□ 0.34
PDLIM2-217ENST00000491330 PCDHGC3Q9UN70 934 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms