RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ERO1BQ86YB8 467 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 SFRP1Q8N474 314 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 CD101Q93033 1021 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PLEKHA8Q96JA3 519 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PRICKLE1Q96MT3 831 aaPredicted RBP11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 OCEL1Q9H607 264 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PIK3C2AO00443 1686 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 TIMM44O43615 452 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A9O60656 530 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 DGAT1O75907 488 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PIGNO95427 931 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A6P19224 532 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 GARTP22102 1010 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A1P22309 533 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A4P22310 534 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A3P35503 534 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A5P35504 534 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 CD97P48960 835 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 RPL14P50914 215 aaKnown RBP11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 NOMO3P69849 1222 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 TLR1Q15399 786 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 VWA5B1Q5TIE3 1220 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 C10orf107Q8IVU9 208 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 TCF12Q99081 682 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 MXRA8Q9BRK3 442 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A7Q9HAW7 530 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A10Q9HAW8 530 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UGT1A8Q9HAW9 530 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PCDHA10Q9Y5I2 948 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 CCDC78A2IDD5 438 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 UBDO15205 165 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 HDAC3O15379 428 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 VAPBO95292 243 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 TFPTP0C1Z6 253 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 PAMP19021 973 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 KLRC2P26717 231 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 GRIA3P42263 894 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 BCAP31P51572 246 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 DGUOKQ16854 277 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 MTX3Q5HYI7 312 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 CCDC167Q9P0B6 97 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 IGSF9Q9P2J2 1179 aa11.57□□□□□ -0.56
CRNKL1-204ENST00000490910 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RIMBP3CA6NJZ7 1639 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RIMBP3BA6NNM3 1639 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RIMBP3Q9UFD9 1639 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 A0A096LPK6 155 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 BBOX1O75936 387 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 EPHA3P29320 983 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 FASTKQ14296 549 aaKnown RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 FOXB2Q5VYV0 432 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 METTL21CQ5VZV1 264 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 SCARA3Q6AZY7 606 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 SWSAP1Q6NVH7 229 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 ZC3H3Q8IXZ2 948 aaKnown RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 FAR2Q96K12 515 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 OLFM1Q99784 485 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 DGCR6LQ9BY27 220 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 NOL11Q9H8H0 719 aaKnown RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 DNAJC28Q9NX36 388 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 SCN3BQ9NY72 215 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 CLUHO75153 1309 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 PRDX6P30041 224 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RARRES1P49788 294 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 BROXQ5VW32 411 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RNF19BQ6ZMZ0 732 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 PHF13Q86YI8 300 aaPredicted RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 HM13Q8TCT9 377 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 CDHR1Q96JP9 859 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RMDN3Q96TC7 470 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 WDR12Q9GZL7 423 aaKnown RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 EPB41L1Q9H4G0 881 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 XPNPEP3Q9NQH7 507 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 KCNH7Q9NS40 1196 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 NCKIPSDQ9NZQ3 722 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 WDR27A2RRH5 827 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 RGL2O15211 777 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 PFDN6O15212 129 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 LDLRP01130 860 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 IVDP26440 423 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 HOXD12P35452 270 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 GPX6P59796 221 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 ZDHHC14Q8IZN3 488 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 CENPSQ8N2Z9 138 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 S100ZQ8WXG8 99 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 CARD8Q9Y2G2 431 aa11.56□□□□□ -0.56
CRNKL1-204ENST00000490910 MYOCOSA0A1B0GUC4 107 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 INPP4BO15327 924 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ITGAXP20702 1163 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 TGM2P21980 687 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms